Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00777 and RBAM_004850

See DNA alignment / Visit BSNT_00777 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_00777___ydbM.1.9828.seq
#    -bsequence pep-align/RBAM_004850___ydbM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00777___ydbM-RBAM_004850___ydbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00777___ydbM-RBAM_004850___ydbM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00777___ydbM
# 2: RBAM_004850___ydbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity:     294/381 (77.2%)
# Similarity:   326/381 (85.6%)
# Gaps:          13/381 ( 3.4%)
# Score: 1555.0
# 
#
#=======================================

BSNT_00777___      1 MSLFIQNDQQRQWMEKIGRIADEFQQTAAEDDEQGRFPAEKIQKLRDAGY     50
                                  |||||.:|||||:|||.|||.|||||||||:||||||
RBAM_004850__      1 -------------MEKIGLLADEFQKTAALDDEAGRFPAEKIQRLRDAGY     37

BSNT_00777___     51 TALTLPASHGGGGISVYDMLLFQERLARGDAPTALSIGWHLSVIGELGEG    100
                     ||||:|...||.|||||||:|||||||||||..||.|||||||:||||||
RBAM_004850__     38 TALTVPEVFGGAGISVYDMVLFQERLARGDAAVALGIGWHLSVMGELGEG     87

BSNT_00777___    101 NSWDEDVFAFVAKEVQNGAVINRAATEAKTGSPTRGGRPGTHAVKKDGKW    150
                     ||||||||:|:.:||:.|||:||||||.:||||||||||||.||||||||
RBAM_004850__     88 NSWDEDVFSFITEEVKKGAVLNRAATERQTGSPTRGGRPGTSAVKKDGKW    137

BSNT_00777___    151 AVNGRKTFTTMSQALDYFLVTAWIEDKQTTGVFLIHKDDPGLSIEETWDM    200
                     .:||||||||:|..|||.|||||||:||||||||||||..|:|:||||||
RBAM_004850__    138 VLNGRKTFTTLSLTLDYMLVTAWIEEKQTTGVFLIHKDQSGVSVEETWDM    187

BSNT_00777___    201 MAMRASGSHDLVLNEVMLDENKLVELLQGPRGAKPNGWLLHIPAIYLGVA    250
                     :||:|:|||||:|:.|.:.:.:||||:.|||.||.|||||||||.|||:|
RBAM_004850__    188 IAMKATGSHDLLLDHVTVSDERLVELISGPRAAKVNGWLLHIPAAYLGIA    237

BSNT_00777___    251 QAARDYAVQFASEYSPNSLNGPIKNVPAVQQRTGEMELELLNARHFLFHI    300
                     ||||||||:|||||||||||||||:|||||||.||||||||.||.|||..
RBAM_004850__    238 QAARDYAVRFASEYSPNSLNGPIKDVPAVQQRIGEMELELLKARQFLFTA    287

BSNT_00777___    301 AQLYDDPERRPHLTSELGAAKHIVTNAALSVVDKAMRIVGAKSLERTNPL    350
                     ||:||||:|||.:.||||.||||||||.||||||||||.|||||||.|||
RBAM_004850__    288 AQMYDDPKRRPFIKSELGIAKHIVTNAGLSVVDKAMRITGAKSLERNNPL    337

BSNT_00777___    351 QRYYRDVRAGLHNPPMDDAVIHKLAAEAFES    381
                     ||||||.||||||||||||||.||||||||.
RBAM_004850__    338 QRYYRDARAGLHNPPMDDAVIGKLAAEAFEQ    368


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