Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00766 and RBAM_004790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:32
# Commandline: needle
# -asequence pep-align/BSNT_00766___dctR.1.9828.seq
# -bsequence pep-align/RBAM_004790___dctR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00766___dctR-RBAM_004790___dctR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00766___dctR-RBAM_004790___dctR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00766___dctR
# 2: RBAM_004790___dctR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 173/226 (76.5%)
# Similarity: 194/226 (85.8%)
# Gaps: 3/226 ( 1.3%)
# Score: 877.0
#
#
#=======================================
BSNT_00766___ 1 MARKEWKVLLIEDDPMVQEVNKDFITTVKGVTVCATAGNGEEGMKLIKEE 50
.:.||||||||||||||||:|||.|.|.:|.|||.:|:||::|||:.
RBAM_004790__ 1 ---MDIKVLLIEDDPMVQEVNKEFITGVSGFSVIATAADGDEGIRLIKDL 47
BSNT_00766___ 51 QPDLVILDVYMPKKDGIKTLQEIRKQKLEVDVIVVSAAKDKETISLMLQN 100
:|.||:|||||||||||||||||||||||||||:||||||||||.|||||
RBAM_004790__ 48 RPGLVVLDVYMPKKDGIKTLQEIRKQKLEVDVIIVSAAKDKETIQLMLQN 97
BSNT_00766___ 101 GAIDYILKPFKLERMRQALEKYKQYKQKIEANDTLSQEQLDAILNIPQQA 150
||.|||||||||||||||||.|||||:|||.:||:||||||.:|.|||..
RBAM_004790__ 98 GAADYILKPFKLERMRQALENYKQYKRKIEEHDTMSQEQLDMLLKIPQNP 147
BSNT_00766___ 151 VQDLPKGLNHFTMNEVTAFLKQQTASLSAEEVAKALGIARVTARRYLDYL 200
.:|||||||||||||:..::||||..|||||.||||||||||||||||:|
RBAM_004790__ 148 SRDLPKGLNHFTMNEILTYMKQQTEPLSAEEAAKALGIARVTARRYLDFL 197
BSNT_00766___ 201 EKTGIIKLDVQYGGVGRPVNRYVLKG 226
||.|.||||:||||||||||||....
RBAM_004790__ 198 EKDGQIKLDIQYGGVGRPVNRYKFVR 223
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