Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00762 and RBAM_004750

See DNA alignment / Visit BSNT_00762 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence pep-align/BSNT_00762___ydbC.1.9828.seq
#    -bsequence pep-align/RBAM_004750___ydbC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00762___ydbC-RBAM_004750___ydbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00762___ydbC-RBAM_004750___ydbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00762___ydbC
# 2: RBAM_004750___ydbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 119
# Identity:      90/119 (75.6%)
# Similarity:   105/119 (88.2%)
# Gaps:           0/119 ( 0.0%)
# Score: 499.0
# 
#
#=======================================

BSNT_00762___      1 MLIKKVICEVDAANAEAFAKAQSQWGALSHISGFIKQAGGWRKTIDEPLT     50
                     |||||::||.|||||||||:|||:|||||.::||:||||||||..|....
RBAM_004750__      1 MLIKKIVCETDAANAEAFAQAQSRWGALSCVNGFVKQAGGWRKNADGLFI     50

BSNT_00762___     51 AEIISVWENREAYDHFMENEHDSIYEENDQKAVILSIEVTVYEEDKPFVH    100
                     ||||||||||:|||.|||||||.|||||:|||.||||||.:||||:|.:|
RBAM_004750__     51 AEIISVWENRQAYDDFMENEHDRIYEENEQKAAILSIEVMLYEEDEPVIH    100

BSNT_00762___    101 DLLHNPDIRYEPNWTVLKA    119
                     :|||:|||||||:|||.||
RBAM_004750__    101 ELLHHPDIRYEPDWTVQKA    119


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