Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00762 and RBAM_004750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:32
# Commandline: needle
# -asequence dna-align/BSNT_00762___ydbC.1.9828.seq
# -bsequence dna-align/RBAM_004750___ydbC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00762___ydbC-RBAM_004750___ydbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00762___ydbC-RBAM_004750___ydbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00762___ydbC
# 2: RBAM_004750___ydbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 362
# Identity: 305/362 (84.3%)
# Similarity: 305/362 (84.3%)
# Gaps: 4/362 ( 1.1%)
# Score: 1273.0
#
#
#=======================================
BSNT_00762___ 1 ATGCTAATCAAAAAGGTGATATGTGAAGTAGACGCTGCAAACGCTGAAGC 50
|||||.|||||||||.|..||||||||..|||||||||||||||||||||
RBAM_004750__ 1 ATGCTGATCAAAAAGATTGTATGTGAAACAGACGCTGCAAACGCTGAAGC 50
BSNT_00762___ 51 ATTTGCAAAAGCGCAGTCACAGTGGGGAGCATTATCGCATATAAGCGGCT 100
||||||..||||.||||||..|||||||||||||||...|.|||..||||
RBAM_004750__ 51 ATTTGCGCAAGCACAGTCAAGGTGGGGAGCATTATCATGTGTAAATGGCT 100
BSNT_00762___ 101 TTATCAAACAGGCCGGCGGCTGGC-GAAAAACGATAGACGAGCC-GCTCA 148
|..||||||||||||||||.|||| |||||||| .||||| ||| |.|||
RBAM_004750__ 101 TCGTCAAACAGGCCGGCGGGTGGCGGAAAAACG-CAGACG-GCCTGTTCA 148
BSNT_00762___ 149 CCGCAGAAATCATCAGTGTATGGGAAAACAGAGAAGCCTATGATCATTTT 198
.||||||.||||||||.||.|||||.||||||.|.|||||||||.|||||
RBAM_004750__ 149 TCGCAGAGATCATCAGCGTTTGGGAGAACAGACAGGCCTATGATGATTTT 198
BSNT_00762___ 199 ATGGAGAACGAACATGACAGCATATACGAGGAAAACGATCAGAAGGCAGT 248
||||||||||||||||||.||||||||||.||||||||.||||||||.|.
RBAM_004750__ 199 ATGGAGAACGAACATGACCGCATATACGAAGAAAACGAGCAGAAGGCTGC 248
BSNT_00762___ 249 AATTCTTTCGATAGAGGTGACGGTGTACGAAGAGGATAAACCGTTCGTTC 298
.||||||||.|||||.||||.|.||||.|||||||||.||||..||.|||
RBAM_004750__ 249 GATTCTTTCAATAGAAGTGATGCTGTATGAAGAGGATGAACCTGTCATTC 298
BSNT_00762___ 299 ACGATCTGTTACATAACCCCGATATCCGGTACGAACCAAACTGGACGGTT 348
||||.|||||||||.||||.||.|||||.||||||||..|||||||||||
RBAM_004750__ 299 ACGAGCTGTTACATCACCCGGACATCCGATACGAACCGGACTGGACGGTT 348
BSNT_00762___ 349 CTGAAGGCATAA 360
|.||||||||||
RBAM_004750__ 349 CAGAAGGCATAA 360
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