Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00762 and RBAM_004750

See Amino acid alignment / Visit BSNT_00762 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence dna-align/BSNT_00762___ydbC.1.9828.seq
#    -bsequence dna-align/RBAM_004750___ydbC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00762___ydbC-RBAM_004750___ydbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00762___ydbC-RBAM_004750___ydbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00762___ydbC
# 2: RBAM_004750___ydbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 362
# Identity:     305/362 (84.3%)
# Similarity:   305/362 (84.3%)
# Gaps:           4/362 ( 1.1%)
# Score: 1273.0
# 
#
#=======================================

BSNT_00762___      1 ATGCTAATCAAAAAGGTGATATGTGAAGTAGACGCTGCAAACGCTGAAGC     50
                     |||||.|||||||||.|..||||||||..|||||||||||||||||||||
RBAM_004750__      1 ATGCTGATCAAAAAGATTGTATGTGAAACAGACGCTGCAAACGCTGAAGC     50

BSNT_00762___     51 ATTTGCAAAAGCGCAGTCACAGTGGGGAGCATTATCGCATATAAGCGGCT    100
                     ||||||..||||.||||||..|||||||||||||||...|.|||..||||
RBAM_004750__     51 ATTTGCGCAAGCACAGTCAAGGTGGGGAGCATTATCATGTGTAAATGGCT    100

BSNT_00762___    101 TTATCAAACAGGCCGGCGGCTGGC-GAAAAACGATAGACGAGCC-GCTCA    148
                     |..||||||||||||||||.|||| |||||||| .||||| ||| |.|||
RBAM_004750__    101 TCGTCAAACAGGCCGGCGGGTGGCGGAAAAACG-CAGACG-GCCTGTTCA    148

BSNT_00762___    149 CCGCAGAAATCATCAGTGTATGGGAAAACAGAGAAGCCTATGATCATTTT    198
                     .||||||.||||||||.||.|||||.||||||.|.|||||||||.|||||
RBAM_004750__    149 TCGCAGAGATCATCAGCGTTTGGGAGAACAGACAGGCCTATGATGATTTT    198

BSNT_00762___    199 ATGGAGAACGAACATGACAGCATATACGAGGAAAACGATCAGAAGGCAGT    248
                     ||||||||||||||||||.||||||||||.||||||||.||||||||.|.
RBAM_004750__    199 ATGGAGAACGAACATGACCGCATATACGAAGAAAACGAGCAGAAGGCTGC    248

BSNT_00762___    249 AATTCTTTCGATAGAGGTGACGGTGTACGAAGAGGATAAACCGTTCGTTC    298
                     .||||||||.|||||.||||.|.||||.|||||||||.||||..||.|||
RBAM_004750__    249 GATTCTTTCAATAGAAGTGATGCTGTATGAAGAGGATGAACCTGTCATTC    298

BSNT_00762___    299 ACGATCTGTTACATAACCCCGATATCCGGTACGAACCAAACTGGACGGTT    348
                     ||||.|||||||||.||||.||.|||||.||||||||..|||||||||||
RBAM_004750__    299 ACGAGCTGTTACATCACCCGGACATCCGATACGAACCGGACTGGACGGTT    348

BSNT_00762___    349 CTGAAGGCATAA    360
                     |.||||||||||
RBAM_004750__    349 CAGAAGGCATAA    360


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