Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00761 and RBAM_004740

See DNA alignment / Visit BSNT_00761 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence pep-align/BSNT_00761___ydbB.1.9828.seq
#    -bsequence pep-align/RBAM_004740___ydbB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00761___ydbB-RBAM_004740___ydbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00761___ydbB-RBAM_004740___ydbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00761___ydbB
# 2: RBAM_004740___ydbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 119
# Identity:      97/119 (81.5%)
# Similarity:   103/119 (86.6%)
# Gaps:           6/119 ( 5.0%)
# Score: 512.0
# 
#
#=======================================

BSNT_00761___      1 MSKMQNLLAIANEVKEKHANFSISEVNDHCVRLAVFTGEYDWHHHPDSDE     50
                     ||.|.|||||||:|||||.||||:|:||||||||||||||||||||||||
RBAM_004740__      1 MSDMLNLLAIANKVKEKHDNFSIAEINDHCVRLAVFTGEYDWHHHPDSDE     50

BSNT_00761___     51 LFIVLEGELLIDFKDKETAVLKTNDSLLIPKGTVHRTRSYVRTVNLCVEH    100
                     .|||||||||||||||||||||.||||||||||:||||||||||||||||
RBAM_004740__     51 WFIVLEGELLIDFKDKETAVLKANDSLLIPKGTIHRTRSYVRTVNLCVEH    100

BSNT_00761___    101 KQAETVIIEEQPC------    113
                     ..|:|||.||:..      
RBAM_004740__    101 THAKTVITEERHADQKDCM    119


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