Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00761 and RBAM_004740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:32
# Commandline: needle
# -asequence dna-align/BSNT_00761___ydbB.1.9828.seq
# -bsequence dna-align/RBAM_004740___ydbB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00761___ydbB-RBAM_004740___ydbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00761___ydbB-RBAM_004740___ydbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00761___ydbB
# 2: RBAM_004740___ydbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity: 299/361 (82.8%)
# Similarity: 299/361 (82.8%)
# Gaps: 20/361 ( 5.5%)
# Score: 1317.0
#
#
#=======================================
BSNT_00761___ 1 ATGTCCAAGATGCAAAACTTGCTCGCCATCGCAAATGAAGTCAAAGAAAA 50
.||||..|.||||..||.||||||||.|||||.|||.|||||||||||||
RBAM_004740__ 1 GTGTCTGATATGCTTAATTTGCTCGCTATCGCCAATAAAGTCAAAGAAAA 50
BSNT_00761___ 51 GCACGCCAATTTTTCAATCTCAGAGGTCAACGACCACTGCGTGCGCCTTG 100
.||||.|||||||||||||.|.|||.||||.||||||||.||||||||||
RBAM_004740__ 51 ACACGACAATTTTTCAATCGCGGAGATCAATGACCACTGTGTGCGCCTTG 100
BSNT_00761___ 101 CGGTGTTTACGGGAGAATATGACTGGCACCATCACCCTGACTCAGACGAA 150
|.||||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_004740__ 101 CAGTGTTTACGGGAGAATATGACTGGCACCATCACCCTGACTCAGATGAA 150
BSNT_00761___ 151 TTGTTTATTGTTCTTGAAGGGGAGCTGCTGATCGATTTTAAGGACAAAGA 200
|.|||.||.|||||.|||||.|||||||||||||||||||||||||||||
RBAM_004740__ 151 TGGTTCATCGTTCTGGAAGGTGAGCTGCTGATCGATTTTAAGGACAAAGA 200
BSNT_00761___ 201 AACCGCGGTGCTCAAAACAAATGACAGCCTGCTGATCCCGAAAGGCACGG 250
||||||.|||||||||.||||||||||||||||.|||||||||||||||.
RBAM_004740__ 201 AACCGCAGTGCTCAAAGCAAATGACAGCCTGCTCATCCCGAAAGGCACGA 250
BSNT_00761___ 251 TTCACCGCACACGCTCTTACGTCAGAACGGTAAATCTCTGTGTGGAGCAT 300
||||||||||.|||||||||||||||||.||.|||||||||||.||||||
RBAM_004740__ 251 TTCACCGCACCCGCTCTTACGTCAGAACCGTGAATCTCTGTGTTGAGCAT 300
BSNT_00761___ 301 AAACAAGCCGAAACCGTCATCATAGAGGAGCAGCCATGCTAA-------- 342
|..||.||..||||.|||||||.||||||.| |.||||||.|
RBAM_004740__ 301 ACGCATGCGAAAACAGTCATCACAGAGGAAC-GTCATGCTGATCAAAAAG 349
BSNT_00761___ 342 ----------- 342
RBAM_004740__ 350 ATTGTATGTGA 360
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