Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05013 and RBAM_004710

See DNA alignment / Visit BSNT_05013 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence pep-align/BSNT_05013___yvaE.1.9828.seq
#    -bsequence pep-align/RBAM_004710___yvaE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05013___yvaE-RBAM_004710___yvaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05013___yvaE-RBAM_004710___yvaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05013___yvaE
# 2: RBAM_004710___yvaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:      77/122 (63.1%)
# Similarity:    91/122 (74.6%)
# Gaps:           4/122 ( 3.3%)
# Score: 372.0
# 
#
#=======================================

BSNT_05013___      1 MNWVFLCLAILFEVAGTVSMKLSSGFTKLIPSLLLIFFYGGSLFFLTLTL     50
                     |.|::|.|||:|||.||||||||:|||||:||:||:.||.|||.||||||
RBAM_004710__      1 MQWIYLSLAIIFEVLGTVSMKLSNGFTKLVPSILLLLFYIGSLCFLTLTL     50

BSNT_05013___     51 KSIDVSVAYAVWSGMGIVLITVIGFWFFQEHVSVMKVISIGLIIAGVVSL    100
                     |.|.||:|||||||||||||:|||.:||.|..||:|.:|:.|||.|||||
RBAM_004710__     51 KYISVSIAYAVWSGMGIVLISVIGIFFFHEQFSVIKAVSVLLIIIGVVSL    100

BSNT_05013___    101 NLIDHARVSE---PVHKSGQYK    119
                     |.|..:..|.   .||..... 
RBAM_004710__    101 NFISESETSSNGISVHTDRNR-    121


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