Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05013 and RBAM_004710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:34
# Commandline: needle
# -asequence dna-align/BSNT_05013___yvaE.1.9828.seq
# -bsequence dna-align/RBAM_004710___yvaE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05013___yvaE-RBAM_004710___yvaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05013___yvaE-RBAM_004710___yvaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05013___yvaE
# 2: RBAM_004710___yvaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 383
# Identity: 246/383 (64.2%)
# Similarity: 246/383 (64.2%)
# Gaps: 40/383 (10.4%)
# Score: 698.5
#
#
#=======================================
BSNT_05013___ 1 GTGAATTGGGTGTTTCTATGCTTGGCGATTTTGTTTGAGGTTGCGGGAAC 50
.||.|.|||.|.|.|.||.|.||.|||||..|.|||||.||...|||.||
RBAM_004710__ 1 ATGCAATGGATTTATTTAAGTTTAGCGATCATTTTTGAAGTATTGGGTAC 50
BSNT_05013___ 51 GGTCAGCATGAAGCTATCATCCGGTTTTACAAAGCTTATTCCCAGTTTGC 100
||||||||||||..|||||...||.||||||||.|||.|.||.|||.|..
RBAM_004710__ 51 GGTCAGCATGAAATTATCAAATGGATTTACAAAACTTGTCCCAAGTATTT 100
BSNT_05013___ 101 TGTTGATT-TTCTTTTATGGAGGGAGTCTTTTCTTTCTGACGCTTACGCT 149
|.|| ||| ||.||||||...||.||.||||..|||||.||..|.||..|
RBAM_004710__ 101 TATT-ATTATTGTTTTATATCGGCAGCCTTTGTTTTCTTACTTTGACTTT 149
BSNT_05013___ 150 AAAATCAATAGATGTATCAGTTGCTTATGCTGTATGGTCAGGGATGGGAA 199
.||||..|||..|||.||..|.||.|||||.||.|||||.||.|||||.|
RBAM_004710__ 150 GAAATATATAAGTGTCTCCATCGCGTATGCGGTCTGGTCTGGAATGGGGA 199
BSNT_05013___ 200 TTGTCCTGATTACAGTCATTGG--TTTTTGGTTTTTTCAAGAACATGTGA 247
|.||.||||||.|.||.||.|| ||||| ||.|||||.|||||..|..
RBAM_004710__ 200 TCGTGCTGATTTCGGTGATCGGAATTTTT--TTCTTTCATGAACAGTTCT 247
BSNT_05013___ 248 GTGTCATGAAAG-----TCATTTCAATTGGATTGATTATTGCCGGTGTTG 292
.||||||.|||| ||..||| || .||||.||...||||||.|
RBAM_004710__ 248 CTGTCATAAAAGCTGTCTCTGTTC--TT---CTGATCATCATCGGTGTCG 292
BSNT_05013___ 293 TGTCTTTAAACCTGAT--------------CGATCATGCTAGGGTGTCTG 328
|.||.||||||.|.|| || ||||...|.||..||
RBAM_004710__ 293 TTTCCTTAAACTTTATTTCTGAAAGTGAAACG-TCATCAAACGGCATC-- 339
BSNT_05013___ 329 AGCCGGTACATAAAAGCGGGCAG-TACAAATGA 360
||| ||.|||| |||.||| .|||.||||
RBAM_004710__ 340 AGC--GTTCATA----CGGACAGAAACAGATGA 366
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