Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05011 and RBAM_004700

See DNA alignment / Visit BSNT_05011 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:33
# Commandline: needle
#    -asequence pep-align/BSNT_05011.1.9828.seq
#    -bsequence pep-align/RBAM_004700___yvaD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05011-RBAM_004700___yvaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05011-RBAM_004700___yvaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05011
# 2: RBAM_004700___yvaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 135
# Identity:      56/135 (41.5%)
# Similarity:    73/135 (54.1%)
# Gaps:          41/135 (30.4%)
# Score: 310.0
# 
#
#=======================================

BSNT_05011         1 -MRYMKLFFLVTDIGFILYWLSAGFSLIPENWAFKHHDHPFMIAWNWSFF     49
                      |:.:|:.||:||||||:||:...|..||:|..||.:|:..::|||||||
RBAM_004700__      1 MMKGLKVLFLITDIGFIVYWIVTFFEWIPKNMVFKDYDNAMIMAWNWSFF     50

BSNT_05011        50 PLDILISVTGLYSLYLQRVNRADWKLMALISLVLTCCSGLQALSF-----     94
                     ||||.||:||||||:|.:...|.|:..||||||||.||||||::|     
RBAM_004700__     51 PLDIFISITGLYSLFLYKRKHALWRPFALISLVLTFCSGLQAIAFWVFIG    100

BSNT_05011        94 -----------------------------------     94
                                                        
RBAM_004700__    101 DFDLMWWAFNLYLLLYPLYFIRKLLVSRKNSCHSF    135


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