Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00744 and RBAM_004560

See DNA alignment / Visit BSNT_00744 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_00744___ydaP.1.9828.seq
#    -bsequence pep-align/RBAM_004560___ydaP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00744___ydaP-RBAM_004560___ydaP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00744___ydaP-RBAM_004560___ydaP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00744___ydaP
# 2: RBAM_004560___ydaP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 574
# Identity:     509/574 (88.7%)
# Similarity:   547/574 (95.3%)
# Gaps:           1/574 ( 0.2%)
# Score: 2674.0
# 
#
#=======================================

BSNT_00744___      1 MAHKTAGQAMTELLEQWGVDHVYGIPGDSINEFIEELRHERNQLKFIQTR     50
                     |..||||..||||||||||.|:||||||||||||||||||||.|.|||||
RBAM_004560__      1 MPSKTAGHVMTELLEQWGVGHIYGIPGDSINEFIEELRHERNNLTFIQTR     50

BSNT_00744___     51 HEEVAALAAAAEAKLTGKIGVCLSIAGPGAVHLLNGLYDAKADGAPVLAI    100
                     |||||||||||||||||:||||||||||||||||||||||||||.|||||
RBAM_004560__     51 HEEVAALAAAAEAKLTGQIGVCLSIAGPGAVHLLNGLYDAKADGVPVLAI    100

BSNT_00744___    101 AGQVSSGEVGRDYFQEIKLEQMFEDVAVFNREVHSAESLPDLLNQAIRTA    150
                     ||||:|.|:|||.|||||||||||||||||::||:||:||||||||||||
RBAM_004560__    101 AGQVASDEIGRDSFQEIKLEQMFEDVAVFNQQVHTAEALPDLLNQAIRTA    150

BSNT_00744___    151 YSKKGVAVLSVSDDLFAEKIKREPVYTSPVYIEGNLEPKKEQLVTCAQYI    200
                     |||||||||:|||||||:|||.|||||||:|::.::|||||.||||||||
RBAM_004560__    151 YSKKGVAVLTVSDDLFAQKIKWEPVYTSPIYLKADIEPKKEHLVTCAQYI    200

BSNT_00744___    201 NNAKKPIILAGQGMKKAKRELLEFADKAAAPIVVTLPAKGVVPDKHPHFL    250
                     ||||||:||||||:|.||.|||.||||||||||:||||||||||.|||||
RBAM_004560__    201 NNAKKPVILAGQGLKSAKEELLAFADKAAAPIVITLPAKGVVPDSHPHFL    250

BSNT_00744___    251 GNLGQIGTKPAYEAMEECDLLIMLGTSFPYRDYLPDDTPAIQLDSDPAKI    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_004560__    251 GNLGQIGTKPAYEAMEECDLLIMLGTSFPYRDYLPDDTPAIQLDSDPAKI    300

BSNT_00744___    301 GKRYPVTAGLVCDSALGLRELTEYIERKEDRRFLNACTEHMQHWWNEIEK    350
                     ||||||.||:|.|:||||:|||||||.|||||||:||||||:|||.||||
RBAM_004560__    301 GKRYPVNAGIVSDAALGLKELTEYIEYKEDRRFLDACTEHMKHWWKEIEK    350

BSNT_00744___    351 DETEATTPLKPQQVVARLQEAAADDAVLSVDVGTVTVWMARHFKMNANQD    400
                     ||||||.|||||||:||||:|||:|||||||||||||||||||||. .||
RBAM_004560__    351 DETEATHPLKPQQVIARLQDAAAEDAVLSVDVGTVTVWMARHFKMK-KQD    399

BSNT_00744___    401 FIVSSWLATMGCGLPGAIAASLSEPERQAIAVCGDGGFSMVMQDLPTAVK    450
                     ||||||||||||||||||||||:|||||:||:||||||||||||||||||
RBAM_004560__    400 FIVSSWLATMGCGLPGAIAASLAEPERQSIAICGDGGFSMVMQDLPTAVK    449

BSNT_00744___    451 YKLPITVVILNNENLGMIEYEQQVKGNIDYVTKLQNVDYAAFAESCGAKG    500
                     ||||||||||||||||||||||:|||||||||:|||:|||||||||||||
RBAM_004560__    450 YKLPITVVILNNENLGMIEYEQRVKGNIDYVTQLQNMDYAAFAESCGAKG    499

BSNT_00744___    501 IKVTKAEELAPAFHEALHSDQPVVVDVMIGNEPPLPGKITYGQAKGFSKY    550
                     |||||.|||||||||||:|::|||:|.:||:|||||||||||||||||||
RBAM_004560__    500 IKVTKHEELAPAFHEALNSNEPVVIDAVIGDEPPLPGKITYGQAKGFSKY    549

BSNT_00744___    551 MLKNFFENQKIEMPSLKKSLKRLF    574
                     ||||||||||||||||||||||||
RBAM_004560__    550 MLKNFFENQKIEMPSLKKSLKRLF    573


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