Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00742 and RBAM_004550

See DNA alignment / Visit BSNT_00742 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_00742___mutT.1.9828.seq
#    -bsequence pep-align/RBAM_004550___mutT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00742___mutT-RBAM_004550___mutT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00742___mutT-RBAM_004550___mutT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00742___mutT
# 2: RBAM_004550___mutT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:      87/149 (58.4%)
# Similarity:   108/149 (72.5%)
# Gaps:           1/149 ( 0.7%)
# Score: 453.0
# 
#
#=======================================

BSNT_00742___      1 MYTQGAFVIALNESQQILLVKRKDVPLWDLPGGRVDPGESAEEAAVREVL     50
                      ..||||||..|:.:.||||||||||||||||||::.||:.|.|||||..
RBAM_004550__      1 -MAQGAFVIIQNDGRDILLVKRKDVPLWDLPGGRIEEGETPEAAAVREAF     49

BSNT_00742___     51 EETGYNAALSAKIGVYQRPKFQDEQHLFFGSITGGQAVADGIETAGLKWV    100
                     ||||||..:..|.|.|:||.|:|.|::|.|:||||..:.:|.|||.|:|.
RBAM_004550__     50 EETGYNVTILQKAGEYERPAFEDTQNVFIGAITGGTPLMNGPETAALRWF     99

BSNT_00742___    101 SLERLPLFMVPNRKRQINDFKNGAQDVNVTVKDRGLLAAIDLLKRRLGK    149
                     |..||||||||||||||.|..|||.:....:|||.||:.:|||:::|..
RBAM_004550__    100 SPNRLPLFMVPNRKRQIKDGLNGAANRKAVLKDRNLLSILDLLRKKLRV    148


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