Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00740 and RBAM_004470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence pep-align/BSNT_00740.1.9828.seq
# -bsequence pep-align/RBAM_004470___lrpC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00740-RBAM_004470___lrpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00740-RBAM_004470___lrpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00740
# 2: RBAM_004470___lrpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 114/180 (63.3%)
# Similarity: 135/180 (75.0%)
# Gaps: 36/180 (20.0%)
# Score: 610.0
#
#
#=======================================
BSNT_00740 1 MFGKHSFLHAFSRELYLSFTKIPEIMCTKSKKKDVEMKLDQIDLNIIEEL 50
||||.:||:||:||
RBAM_004470__ 1 ------------------------------------MKLDNVDLSIIKEL 14
BSNT_00740 51 KKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYTLEVDQKKLGLP 100
::||||||||||||||||.||||||||||||||:||:|||::||||:|||
RBAM_004470__ 15 QRDSRLSMRELGRKIKLSAPSVTERVRQLESFGVIKRYTLDIDQKKIGLP 64
BSNT_00740 101 VSCIVEATVKNADYERFKSYIQTLPNIEFCYRIAGAACYMLKINAESLEA 150
|||||||||||..|::||:|||::||||||:|:|||||||||:||:|||.
RBAM_004470__ 65 VSCIVEATVKNGKYDQFKTYIQSIPNIEFCFRVAGAACYMLKMNADSLET 114
BSNT_00740 151 VEDFINKTSPYAQTVTHVIFSEIDTKNGRG 180
:|.|||:||||||||||||||||||||...
RBAM_004470__ 115 IEHFINRTSPYAQTVTHVIFSEIDTKNVLD 144
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