Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00739 and RBAM_004460

See DNA alignment / Visit BSNT_00739 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_00739___ydzA.1.9828.seq
#    -bsequence pep-align/RBAM_004460___ydzA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00739___ydzA-RBAM_004460___ydzA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00739___ydzA-RBAM_004460___ydzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00739___ydzA
# 2: RBAM_004460___ydzA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 96
# Identity:      79/96 (82.3%)
# Similarity:    88/96 (91.7%)
# Gaps:           0/96 ( 0.0%)
# Score: 431.0
# 
#
#=======================================

BSNT_00739___      1 MLQTPIGRLRTMGFIEGMSLLILLFIAMPLKYWAGLPLAVTIVGSVHGGL     50
                     ||.||||||||||||||||||:||||||||||||..||||||.||:||||
RBAM_004460__      1 MLHTPIGRLRTMGFIEGMSLLVLLFIAMPLKYWAHHPLAVTIAGSIHGGL     50

BSNT_00739___     51 FILYLLVLAYATFSVKWPLKWSAAGFVAAFVPFGNFLYDRGLRKYK     96
                     ||:||.|||||.|:|||.:|||||||:|||:|||||:||||||.|:
RBAM_004460__     51 FIIYLAVLAYAAFTVKWHVKWSAAGFIAAFIPFGNFIYDRGLRHYQ     96


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