Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00739 and RBAM_004460

See Amino acid alignment / Visit BSNT_00739 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence dna-align/BSNT_00739___ydzA.1.9828.seq
#    -bsequence dna-align/RBAM_004460___ydzA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00739___ydzA-RBAM_004460___ydzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00739___ydzA-RBAM_004460___ydzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00739___ydzA
# 2: RBAM_004460___ydzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     222/299 (74.2%)
# Similarity:   222/299 (74.2%)
# Gaps:          16/299 ( 5.4%)
# Score: 829.5
# 
#
#=======================================

BSNT_00739___      1 ATGCTGCAAACGCCGATCGGAAGACTTCGCACGATGGGTTTTATTGAAGG     50
                     |||.|.||.|||||||||||.|||||||||||||||||.|||||||||||
RBAM_004460__      1 ATGTTACACACGCCGATCGGCAGACTTCGCACGATGGGGTTTATTGAAGG     50

BSNT_00739___     51 AATGTCACTCTTAATCCTGTTGTTCATCGCTATGCCGCTTAAATATTGGG    100
                     ||||||.||.||..|.|||.||||.|||||.||||||||.||.|||||||
RBAM_004460__     51 AATGTCGCTTTTGGTGCTGCTGTTTATCGCGATGCCGCTGAAGTATTGGG    100

BSNT_00739___    101 CAGGCCTTCCGCTTGCGGTGACAATTGTCGGTTCGGTTCACGGCGGGTTG    150
                     |....|.||||||.||.||.||.||||.||||||..||||||||||.|||
RBAM_004460__    101 CTCATCATCCGCTCGCCGTCACCATTGCCGGTTCCATTCACGGCGGTTTG    150

BSNT_00739___    151 TTCATTTTGTATTTACTTGTCT--------TGGCTTATGCAACCTTCTCT    192
                     ||.||    .|||||    |||        ||||.|||||..|.||..||
RBAM_004460__    151 TTTAT----CATTTA----TCTGGCGGTGCTGGCGTATGCGGCGTTTACT    192

BSNT_00739___    193 GTCAAATGGCCGCTGAAATGGTCAGCTGCCGGCTTCGTCGCCGCTTTCGT    242
                     ||||||||||...|||||||||||||.|||||.||..||||.||.||..|
RBAM_004460__    193 GTCAAATGGCATGTGAAATGGTCAGCCGCCGGTTTTATCGCGGCCTTTAT    242

BSNT_00739___    243 CCCATTCGGAAATTTTTTGTACGACCGCGGATTAAGGAAATATAAATAA    291
                     .||.|||||.||||||.|.||.||.|||||..|.||..|.|||.|||||
RBAM_004460__    243 TCCGTTCGGTAATTTTATTTATGATCGCGGCCTGAGACATTATCAATAA    291


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