Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00738 and RBAM_004450

See DNA alignment / Visit BSNT_00738 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_00738___ydaH.1.9828.seq
#    -bsequence pep-align/RBAM_004450___ydaH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00738___ydaH-RBAM_004450___ydaH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00738___ydaH-RBAM_004450___ydaH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00738___ydaH
# 2: RBAM_004450___ydaH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     235/269 (87.4%)
# Similarity:   253/269 (94.1%)
# Gaps:           0/269 ( 0.0%)
# Score: 1188.0
# 
#
#=======================================

BSNT_00738___      1 MHVITTQVLFIFCFLLLIHSIETLAYATRLSGARVGFIASALSLFNVMVI     50
                     |||||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_004450__      1 MHVITSQVLFIFCFLLLIHSIETLAYATRLSGARVGFIASALSLFNVMVI     50

BSNT_00738___     51 VSRMSNMVQQPFTGHLIDDAGKNALAIVGDQFRFLIFGSTVGTILGIILL    100
                     ||||||||||||||||||.||.|||::||.|||||||||||||:|||.||
RBAM_004450__     51 VSRMSNMVQQPFTGHLIDAAGSNALSLVGAQFRFLIFGSTVGTMLGICLL    100

BSNT_00738___    101 PSFVALFSRAIIHLAGGGGSVFQVFRKGFSKQGFKNALSYLRLPSISYVK    150
                     |:|||||||||||||.|||||.|||:||||..|.|:|.||:||||:||:|
RBAM_004450__    101 PTFVALFSRAIIHLADGGGSVMQVFKKGFSLNGLKHARSYIRLPSVSYLK    150

BSNT_00738___    151 GFHMRLIPKRLFVINMLITSIYTIGVLSALYAGLLAPERSTTAVMASGLI    200
                     |...|:||||||||||:|||||||||||||||||||||.|||||||||||
RBAM_004450__    151 GLQFRMIPKRLFVINMVITSIYTIGVLSALYAGLLAPEHSTTAVMASGLI    200

BSNT_00738___    201 NGIATMLLAIFVDPKVSVLADDVAKGKRSYIYLKWTSVTMVTSRVAGTLL    250
                     ||:||||||:||||||||||||||||||||:.|||||:||||||||||||
RBAM_004450__    201 NGVATMLLAVFVDPKVSVLADDVAKGKRSYVSLKWTSLTMVTSRVAGTLL    250

BSNT_00738___    251 AQLMFIPGAYYIAWLTKWF    269
                     |||:||||||||||:|||.
RBAM_004450__    251 AQLVFIPGAYYIAWVTKWM    269


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