Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00736 and RBAM_004430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence pep-align/BSNT_00736___ydaF.1.9828.seq
# -bsequence pep-align/RBAM_004430___ydaF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00736___ydaF-RBAM_004430___ydaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00736___ydaF-RBAM_004430___ydaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00736___ydaF
# 2: RBAM_004430___ydaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 99/207 (47.8%)
# Similarity: 136/207 (65.7%)
# Gaps: 24/207 (11.6%)
# Score: 562.0
#
#
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BSNT_00736___ 1 MFTCKVNEHITIRLLEPNDAERLAELIIQNQQRLSQWLFWAENPSSADTY 50
||:|::.||:|||||...|.:.|..::.:||..||:||.|||..:..|||
RBAM_004430__ 1 MFSCQIREHLTIRLLAKEDTDELYSVMKRNQNHLSEWLSWAEELADFDTY 50
BSNT_00736___ 51 RETIIPEWRHQYADLNGIEAGLLYDGSLCGMISLHNLDQVNRKAEIGYWI 100
|:.||||||::||:.||.:||:...|..|||||:||:|..|:|||||||:
RBAM_004430__ 51 RDVIIPEWRYKYAEENGFDAGIFVKGRFCGMISIHNVDTANQKAEIGYWM 100
BSNT_00736___ 101 AKDFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGF 150
.::.||.|||||:||.:|.:||::|.|||:.|.||..|.|||||.||:||
RBAM_004430__ 101 DREHEGFGIITASCRAVINHAFQDLGLNRIMISAAEKNMKSRAVAERLGF 150
BSNT_00736___ 151 LEEGRARDGLYVNGRHHDLVYYSLLKREWEGEK----------------- 183
.:||..|:|::|.|.:||.|.||:|||||..::
RBAM_004430__ 151 QKEGLTREGIFVQGAYHDTVNYSMLKREWSEDRQNSTFLGLNVSPMWKSN 200
BSNT_00736___ 183 ------- 183
RBAM_004430__ 201 SGDVKKE 207
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