Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00728 and RBAM_004390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence pep-align/BSNT_00728___mtlR.1.9828.seq
# -bsequence pep-align/RBAM_004390___mtlR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00728___mtlR-RBAM_004390___mtlR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00728___mtlR-RBAM_004390___mtlR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00728___mtlR
# 2: RBAM_004390___mtlR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 694
# Identity: 511/694 (73.6%)
# Similarity: 612/694 (88.2%)
# Gaps: 0/694 ( 0.0%)
# Score: 2637.0
#
#
#=======================================
BSNT_00728___ 1 MYMTAREQKLLKHLLLQNRYITVTELAELMQVSTRTIHRELKSIKPLMET 50
||||||||||:|||||||||.||.||||.:||||||:|||||:|||:||:
RBAM_004390__ 1 MYMTAREQKLMKHLLLQNRYETVHELAEALQVSTRTVHRELKTIKPMMES 50
BSNT_00728___ 51 VGLTLDKQPGKGLKAVGSPEDKQKLLTDLSYEQHEYSADERKLLILCSLL 100
.||.|||||||||||||:||||||||:||||||:||||:|||||||||||
RBAM_004390__ 51 FGLALDKQPGKGLKAVGNPEDKQKLLSDLSYEQYEYSAEERKLLILCSLL 100
BSNT_00728___ 101 ESQEPVKLYTLAHDLQVTNATVSYDLDELEKWISPFGLTLIRKRGFGIQL 150
|||||:|||:||::|||||||:||||||||.||:||||||||||||||||
RBAM_004390__ 101 ESQEPIKLYSLANELQVTNATISYDLDELETWIAPFGLTLIRKRGFGIQL 150
BSNT_00728___ 151 IGPENAKRKIVGNLIVNRLDIQMFLEAVELNIKGKTDSSEKMFGVVSKGE 200
.|||||||||||||||||||||.||||||||||||.|.:|||||||:|.|
RBAM_004390__ 151 TGPENAKRKIVGNLIVNRLDIQSFLEAVELNIKGKPDDAEKMFGVVNKAE 200
BSNT_00728___ 201 LLKMERILFQLKEKIAFSLSDSSYIALVVHLTYAIERIKLGETITMEQNE 250
||||:|:|.|||||||.:||||||:||.||||:|::||:||||||||.:|
RBAM_004390__ 201 LLKMDRLLIQLKEKIAIALSDSSYMALAVHLTFAMDRIRLGETITMEDSE 250
BSNT_00728___ 251 LEELKNAKESSSALEIAGELERAFGVTIPEAEVGYITIHLRSANRKYKTE 300
|:.|:..||..||||:|.|||:||||:|||||:|||||||||||||||||
RBAM_004390__ 251 LKALQQTKEYGSALEMAKELEKAFGVSIPEAEIGYITIHLRSANRKYKTE 300
BSNT_00728___ 301 YKAQEIELETALQTKRLIAFISDKIRMDLTKNYSLYEGLIAHLEPAVSRI 350
:|.::||:|||||||:||.|||:||::|||:|.|||:|||||||||::|:
RBAM_004390__ 301 FKPEDIEVETALQTKQLIGFISEKIKIDLTENGSLYDGLIAHLEPAINRV 350
BSNT_00728___ 351 KENIEIYNPMKEQIKRDYFLLYMAIEEGVEKYFPGMSFTDDEIAFIVLHF 400
||||::||||.|||||||||||||:|||:||:|||:.|:|:|||||||||
RBAM_004390__ 351 KENIDMYNPMTEQIKRDYFLLYMAVEEGMEKFFPGLLFSDNEIAFIVLHF 400
BSNT_00728___ 401 GSALEIKKEEAKVKALVVCSSGIGSSKMLASRLKKEMPEIESFDMSSLIE 450
|||||||:||||:|||:|||||||||||||||||||:.||.|||||||||
RBAM_004390__ 401 GSALEIKREEAKIKALIVCSSGIGSSKMLASRLKKELSEIRSFDMSSLIE 450
BSNT_00728___ 451 LKGKDVQAYDMIVSTVPIPYENIDYIMVSPLLNEEDANQVKQYIKRKIPL 500
||.:|:.||||||||||||||||||:|||||||||||:||||||||||||
RBAM_004390__ 451 LKDRDITAYDMIVSTVPIPYENIDYVMVSPLLNEEDADQVKQYIKRKIPL 500
BSNT_00728___ 501 ILNKKRSTKEEAQQADVPDMLEAAESIGRYMEVIQNVLRHFTLAQLKTNP 550
||:|||:.|.|.:|.:.|||||||..:..|..|||:|||:|::..:.:|.
RBAM_004390__ 501 ILDKKRNGKREEKQPETPDMLEAAGRMAHYAAVIQSVLRNFSIKSIDSNT 550
BSNT_00728___ 551 DHSMLLLELFQQLKKDGLIRDPEKAEVCLAEREKQGGLGIPGTNMALYHL 600
.:.:.|..:|..|:::||:.:.:|....|||||:|||||||||.||||||
RBAM_004390__ 551 AYELFLNRMFDMLEQEGLVHNAQKTAQRLAERERQGGLGIPGTAMALYHL 600
BSNT_00728___ 601 KNDEIVLPFFKMFDLSTSYEVDGMDGITLRMTRILVMMAPGSLSAEGSEI 650
||:|||.||||::||:....|.||||.:|.:.|.||||||..::||||||
RBAM_004390__ 601 KNEEIVTPFFKIYDLTAPCSVKGMDGNSLTVDRALVMMAPADMAAEGSEI 650
BSNT_00728___ 651 LSAISSAIIESGESMAGFQEEGEQELYQRLNRIFFTWMKEKNIL 694
|||:|||||||..|:..||.|.|.:||:|||::|:.:::||...
RBAM_004390__ 651 LSAVSSAIIESEGSIKAFQTEDEADLYKRLNKLFYHFIQEKGQR 694
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