Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00726 and RBAM_004380

See DNA alignment / Visit BSNT_00726 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_00726___ycsN.1.9828.seq
#    -bsequence pep-align/RBAM_004380___ycsN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00726___ycsN-RBAM_004380___ycsN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00726___ycsN-RBAM_004380___ycsN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00726___ycsN
# 2: RBAM_004380___ycsN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     244/300 (81.3%)
# Similarity:   269/300 (89.7%)
# Gaps:           0/300 ( 0.0%)
# Score: 1324.0
# 
#
#=======================================

BSNT_00726___      1 MQRIQLAEDLQFSRVIHGLWRLNEWNYSDAELLSLIEWCIDHGITTFDHA     50
                     ||||||||||:|||||||||||||||.||.|||:||||||..||||||||
RBAM_004380__      1 MQRIQLAEDLEFSRVIHGLWRLNEWNVSDGELLNLIEWCISQGITTFDHA     50

BSNT_00726___     51 DIYGGYTCEKLFGNALALSPGLRENIELVTKCGIVLESPERPAHRSHHYN    100
                     |||||||||||||.||:|||.:||.||:|||||||:||||||.::|||||
RBAM_004380__     51 DIYGGYTCEKLFGGALSLSPSIREQIEIVTKCGIVIESPERPGNKSHHYN    100

BSNT_00726___    101 TSKSHILASVEQSLMNLRTDYIDVLLIHRPDPLMDPEGVAEAFQALKCSG    150
                     |||||||||.||||:||.|||:|||||||||||||||.|||||.|||.||
RBAM_004380__    101 TSKSHILASAEQSLLNLNTDYLDVLLIHRPDPLMDPEAVAEAFHALKSSG    150

BSNT_00726___    151 KVRYFGVSNFKDHQYRMLESYLPEKLVTNQIELSAYELENMLDGTLNLCQ    200
                     |||||||||||.||||||||||.:.|:|||||:|||||||:.||||:.||
RBAM_004380__    151 KVRYFGVSNFKAHQYRMLESYLDDPLITNQIEISAYELENIHDGTLDFCQ    200

BSNT_00726___    201 EKRIPPMAWSPLAGGKVFTGDTEKDRRVRTALESVQAEIGAASLDEVMYA    250
                     |||||||||||:|||.||||.::||.|:|.||.|||.||||||:||||||
RBAM_004380__    201 EKRIPPMAWSPIAGGSVFTGQSDKDVRIRAALRSVQEEIGAASIDEVMYA    250

BSNT_00726___    251 WLYTHPADIMPIVGSGKRERISAAINALSYKLDQDQWFRIFTAVQGYDIP    300
                     ||:||||||||||||||..|||||:.|.:|||..||||||:|:|||.|||
RBAM_004380__    251 WLFTHPADIMPIVGSGKENRISAAVRASAYKLSHDQWFRIYTSVQGCDIP    300


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