Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00725 and RBAM_004370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence pep-align/BSNT_00725___pbpC.1.9828.seq
# -bsequence pep-align/RBAM_004370___pbpC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00725___pbpC-RBAM_004370___pbpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00725___pbpC-RBAM_004370___pbpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00725___pbpC
# 2: RBAM_004370___pbpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 668
# Identity: 513/668 (76.8%)
# Similarity: 587/668 (87.9%)
# Gaps: 1/668 ( 0.1%)
# Score: 2755.0
#
#
#=======================================
BSNT_00725___ 1 MLKKCILLVFLCVGLIGLIGCSKTDSPEDRMEAFVKQWNDQQFDDMYQSL 50
:||.:.|:.|..|:|||||||||:|.||||:.|||.||...:|.|||||
RBAM_004370__ 1 -MKKGLYLLLLLAGIIGLIGCSKTESAEDRMKDFVKDWNGGHYDKMYQSL 49
BSNT_00725___ 51 TKDVKKEISKKDFVNRYKAIYEQAGVKNLKVTAGEVDKDDQDNKTMKHIP 100
|:|.||:.|||||:.||:.:|||||||||||||.:.|:||:....::||.
RBAM_004370__ 50 TQDEKKKRSKKDFIKRYETVYEQAGVKNLKVTAEKQDEDDKKKDDLQHID 99
BSNT_00725___ 101 YKVSMNTNAGKVSFKNTAVLKLEKTDDEESWNIDWDPSFIFKQLADDKTV 150
|||||:|.||||:|:||||||.|||||.|||||||:||||||||:|||||
RBAM_004370__ 100 YKVSMDTKAGKVAFENTAVLKKEKTDDGESWNIDWNPSFIFKQLSDDKTV 149
BSNT_00725___ 151 QIMSIEPKRGQIYDKNGKGLAVNTDVPEIGIVPGELGDKKEKVIKELAKK 200
||.:.||||||||||:||||||||:||||||:||:||..|:.|||:|::|
RBAM_004370__ 150 QIANEEPKRGQIYDKDGKGLAVNTEVPEIGIIPGKLGKDKDSVIKKLSEK 199
BSNT_00725___ 201 LDLTEDDIKKKLDQGWVKDDSFVPLKKVKPDQEKLVSEATSLQGVTRTNV 250
|||:|||||.||:||||||||:|||:|::||.|..|....:|.|||:|.|
RBAM_004370__ 200 LDLSEDDIKSKLNQGWVKDDSYVPLQKIRPDDESKVKSLLALDGVTKTKV 249
BSNT_00725___ 251 SSRYYPYGEKTAHLTGYVRAITAEELKKKKEGTYSDTSNIGIAGLENVYE 300
||||||||||.||||||::.||||:|||.|:|.|||||.|||||||||||
RBAM_004370__ 250 SSRYYPYGEKAAHLTGYIKTITAEQLKKAKDGQYSDTSKIGIAGLENVYE 299
BSNT_00725___ 301 DKLRGTTGWKIYVPQTGEVIAEKKAKDGEDLHLTIDIKTQTKLYDELKDD 350
|||||||||||||||||||||||||:.|:|:|:|||:||||||||.:|||
RBAM_004370__ 300 DKLRGTTGWKIYVPQTGEVIAEKKAESGQDIHVTIDMKTQTKLYDSMKDD 349
BSNT_00725___ 351 SGAAVALQPKTGETLALVSAPSYDPNGFIFGWSDKEWKKLNKDKNNPFSA 400
|||||||:|:|||||||||||||||||||||||.|||||||:||||||||
RBAM_004370__ 350 SGAAVALEPQTGETLALVSAPSYDPNGFIFGWSGKEWKKLNEDKNNPFSA 399
BSNT_00725___ 401 KFNKTYAPGSTIKPIAAAIGIKNGTLKADEKKTIKGKEWQKDSSWGGYSV 450
||||.|||||||||||||:|:.||||||.|||.|.|||||||||||||.|
RBAM_004370__ 400 KFNKLYAPGSTIKPIAAAVGLTNGTLKASEKKKITGKEWQKDSSWGGYHV 449
BSNT_00725___ 451 TRVSERLQQVDLENALITSDNIYFAQNALDMGADTFTKGLKTFGFSEDVP 500
|||||||.:|||||||||||||||||||:|.|||.||||||||||.|::|
RBAM_004370__ 450 TRVSERLNEVDLENALITSDNIYFAQNAIDAGADAFTKGLKTFGFDEEIP 499
BSNT_00725___ 501 YEFPIQKSSIANDKLDSDILLADTGYGQGQMQMSPLHLATAYTPFVDNGD 550
|:|||:||||||.||||:|||.|||||||||.|||||||..||.||.:|:
RBAM_004370__ 500 YQFPIEKSSIANGKLDSEILLGDTGYGQGQMLMSPLHLAADYTAFVTDGN 549
BSNT_00725___ 551 LVKPTLIKKDSQTADVWHKQVVTKEGAADITKGLKGVVEDERGSAYQPVV 600
||||||||...:|..:||||||:|..|.:|||||:|||||.|||||||.|
RBAM_004370__ 550 LVKPTLIKDGEKTPQIWHKQVVSKANAEEITKGLRGVVEDPRGSAYQPAV 599
BSNT_00725___ 601 KGITVAGKTGTAELKTSKDDKDGTENGWFVGYDYKNKDLLVAMMIQNVQD 650
.|||||||||||||||||:||||.|||||||||||.||||:|||||:|:.
RBAM_004370__ 600 SGITVAGKTGTAELKTSKEDKDGKENGWFVGYDYKKKDLLIAMMIQDVKK 649
BSNT_00725___ 651 RGGSHYVVEKAKKQFQSN 668
||||||||||||||||::
RBAM_004370__ 650 RGGSHYVVEKAKKQFQNH 667
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