Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00719 and RBAM_004340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence pep-align/BSNT_00719___ycsK.1.9828.seq
# -bsequence pep-align/RBAM_004340___ycsK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00719___ycsK-RBAM_004340___ycsK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00719___ycsK-RBAM_004340___ycsK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00719___ycsK
# 2: RBAM_004340___ycsK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 150/213 (70.4%)
# Similarity: 174/213 (81.7%)
# Gaps: 0/213 ( 0.0%)
# Score: 778.0
#
#
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BSNT_00719___ 1 MMLRYTALGDSLTTGRGSGLFSPGFVQRFGDMMEADLKTRTAINIFARSG 50
|.|.|||||||||||||||.||.|||||||.||..||:|||.:::||:||
RBAM_004340__ 1 MGLVYTALGDSLTTGRGSGPFSAGFVQRFGRMMAEDLQTRTDVSVFAKSG 50
BSNT_00719___ 51 LNTEEILGLLSYPYVQKCIRDADMITITGCGNDLIDSVLAYQTSKDETIF 100
|.|.|||||:|.||:|:.|:.|||||||||||||||||.|||.:.|.::|
RBAM_004340__ 51 LETGEILGLMSLPYIQRRIQAADMITITGCGNDLIDSVQAYQQTSDASVF 100
BSNT_00719___ 101 SRVSAHCHENFEKMIAKVAEIKGENPSPYAIRVFNLYNPFPEIDIAGKWI 150
:.||:||||||||||||:|.:||.:||||.|||||||||||.|.||.|||
RBAM_004340__ 101 TGVSSHCHENFEKMIAKIAALKGPHPSPYEIRVFNLYNPFPGISIAEKWI 150
BSNT_00719___ 151 TSFNSHLETLASAPHVKIADAYSIFKGKEQEYLSFDGVHPNSKGYQAMAE 200
:|:|:||.||||||||||||.:|.||||..||||.|.||||||||:.||.
RBAM_004340__ 151 SSYNAHLSTLASAPHVKIADVHSAFKGKMNEYLSHDRVHPNSKGYEVMAC 200
BSNT_00719___ 201 AVHKLGYKELSVS 213
.:..|||..|:.|
RBAM_004340__ 201 VLRGLGYGSLARS 213
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