Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00715 and RBAM_004310

See DNA alignment / Visit BSNT_00715 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_00715___kipI.1.9828.seq
#    -bsequence pep-align/RBAM_004310___kipI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00715___kipI-RBAM_004310___kipI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00715___kipI-RBAM_004310___kipI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00715___kipI
# 2: RBAM_004310___kipI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     165/246 (67.1%)
# Similarity:   202/246 (82.1%)
# Gaps:           9/246 ( 3.7%)
# Score: 864.5
# 
#
#=======================================

BSNT_00715___      1 MTVRY------QIEQLGDSAMMIRFGEEINEQVNGIVHAAAAYIEEQPFP     44
                      .::|      .|:..||||::||||..|:|:||..||||||.:||:|||
RBAM_004310__      1 -MMQYSGNTALDIQPYGDSAVIIRFGGHISEEVNSRVHAAAACMEERPFP     49

BSNT_00715___     45 GFIECIPAFTSLTVFYDMYEVYKHLPQGISSPFEKVKCDVEERLAEIAED     94
                     ||:||||||||||:|||:|.| .::.:|: |||..||.:|.|||:.|...
RBAM_004310__     50 GFVECIPAFTSLTIFYDVYAV-SNIKKGV-SPFALVKKEVTERLSHIMTG     97

BSNT_00715___     95 YEVNRRIVEIPVCYGGEFGPDLEEVAKINQLSPEEVIDIHTNGEYVVYML    144
                     .:..||::||||||||:|||||||||::|.|:||:||.|||.|||:||||
RBAM_004310__     98 RKEERRVMEIPVCYGGDFGPDLEEVAEMNDLTPEDVIRIHTEGEYLVYML    147

BSNT_00715___    145 GFAPGFPFLGGMSKRIAAPRKSSPRPSIPAGSVGIAGLQTGVYPISTPGG    194
                     |||||||||||||:||.||||:|||||||||||||||:||||||||||||
RBAM_004310__    148 GFAPGFPFLGGMSERIRAPRKASPRPSIPAGSVGIAGMQTGVYPISTPGG    197

BSNT_00715___    195 WQLIGKTPLALFRPQENPPTLLRAGDTVKFVRISEKDYHAYKEESN    240
                     |||||.|||.||||:|:||:|||||||||||||:.::|...||.:.
RBAM_004310__    198 WQLIGSTPLRLFRPEEHPPSLLRAGDTVKFVRITAEEYSRIKEGAE    243


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