Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00715 and RBAM_004310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence dna-align/BSNT_00715___kipI.1.9828.seq
# -bsequence dna-align/RBAM_004310___kipI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00715___kipI-RBAM_004310___kipI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00715___kipI-RBAM_004310___kipI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00715___kipI
# 2: RBAM_004310___kipI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 762
# Identity: 532/762 (69.8%)
# Similarity: 532/762 (69.8%)
# Gaps: 69/762 ( 9.1%)
# Score: 1763.0
#
#
#=======================================
BSNT_00715___ 1 ATGACTGTACGATATC--AAATCGA-----------ACAGC---TCGGTG 34
|||| ||.|..|||.| ||||..| ||||| .|||||
RBAM_004310__ 1 ATGA-TGCAGTATAGCGGAAATACAGCGCTTGATATACAGCCGTACGGTG 49
BSNT_00715___ 35 ATTCTGCAATGATGATCCGATTCGGAGAAGAAATCAATGAACAGGTCAAC 84
||||.||..|.||.|||||.||.||.|...|.||||..|||.||||||||
RBAM_004310__ 50 ATTCCGCCGTTATCATCCGCTTTGGCGGGCACATCAGCGAAGAGGTCAAC 99
BSNT_00715___ 85 GGCATTGTCCACGCCGCGGCCGCTTATATAGAAGAACAGCCATTTCCGGG 134
.||...||.||.||.|||||.||.|.|||.|||||||.|||.||||||||
RBAM_004310__ 100 AGCCGGGTGCATGCGGCGGCAGCCTGTATGGAAGAACGGCCGTTTCCGGG 149
BSNT_00715___ 135 ATTCATTGAATGTATCCCGGCTTTTACAAGTCTAACTGTATTTTATGATA 184
.|||.||||||||||.|||||.||.|||||..||||..|.|||||||||.
RBAM_004310__ 150 CTTCGTTGAATGTATTCCGGCATTCACAAGCTTAACGATCTTTTATGATG 199
BSNT_00715___ 185 TGTATGAAGTGTACAAGCATTTGCCTC-----AAGGCATAAGCTCACCTT 229
||||||..||.| |||.||| |||||.| |||.||||
RBAM_004310__ 200 TGTATGCCGTCT-CAAACAT-------AAAAAAAGGCGT---CTCTCCTT 238
BSNT_00715___ 230 TTGAGAAGGTCAAGTGCGATGTCGA-AGAGCGCCTGGCAGAAATA----- 273
|||....|||||||...||.|| || |||.||.|| |||..|||
RBAM_004310__ 239 TTGCCCTGGTCAAGAAAGAAGT-GACAGAACGTCT--CAGCCATATAATG 285
BSNT_00715___ 274 ----GCCG--AAGACTATGAGGTCAACCGCCGTATTGTAGAAATTCCTGT 317
|||| |||| || |.|||||..|..|.|||||.||.||
RBAM_004310__ 286 ACCGGCCGCAAAGA-----AG----AGCGCCGGGTGATGGAAATCCCCGT 326
BSNT_00715___ 318 CTGCTATGGCGGTGAATTTGGTCCGGATTTAGAAGAGGTGGCGAAGATCA 367
.|||||.||||||||.||.|||||.||||||||||||||.||..||||.|
RBAM_004310__ 327 TTGCTACGGCGGTGATTTCGGTCCCGATTTAGAAGAGGTCGCTGAGATGA 376
BSNT_00715___ 368 ATCAGCTGTCACCGGAGGAAGTAATCGACATTCATACAAACGGTGAATAT 417
|..|.|||.|.|||||.||.||.|||..|||||||||..|.||.||||||
RBAM_004310__ 377 ACGATCTGACCCCGGAAGACGTCATCCGCATTCATACTGAAGGCGAATAT 426
BSNT_00715___ 418 GTGGTGTATATGCTTGGCTTCGCGCCCGGTTTTCCTTTTCTAGGCGGGAT 467
.|.||.||||||||.||.||.|||||.||.|||||.|||.||||.||.||
RBAM_004310__ 427 CTCGTTTATATGCTCGGATTTGCGCCGGGATTTCCGTTTTTAGGAGGAAT 476
BSNT_00715___ 468 GTCAAAACGCATTGCAGCTCCGAGAAAATCATCGCCAAGACCGTCGATTC 517
|||..|.||.||...|||.||||||||..|.||||||||.|||||.||.|
RBAM_004310__ 477 GTCTGAGCGGATCAGAGCGCCGAGAAAGGCGTCGCCAAGGCCGTCCATCC 526
BSNT_00715___ 518 CCGCAGGTTCGGTCGGTATTGCGGGATTGCAGACAGGCGTTTACCCGATT 567
|.||.|||||.||.||.||.||||||.|||||||.||.||.||.|||||.
RBAM_004310__ 527 CGGCCGGTTCAGTAGGAATCGCGGGAATGCAGACCGGTGTGTATCCGATA 576
BSNT_00715___ 568 TCAACGCCGGGCGGCTGGCAGCTGATCGGCAAAACGCCGCTGGCTCTTTT 617
||.||.||.||||||||||||||||||||||..||.|||||...||||||
RBAM_004310__ 577 TCCACTCCCGGCGGCTGGCAGCTGATCGGCAGCACCCCGCTCCGTCTTTT 626
BSNT_00715___ 618 CCGGCCGCAGGAAAACCCGCCGA--CATTGCTGCGGGCGGGAGATACTGT 665
|.|||||.|.|||.|.||||||| |.|| ||.|.|||||.|||||.||
RBAM_004310__ 627 CAGGCCGGAAGAACATCCGCCGAGTCTTT--TGAGAGCGGGCGATACGGT 674
BSNT_00715___ 666 GAAATTCGTTCGCATCTCAGAAAAAGACTATCA--CGCCTAT-AAGGA-G 711
|||||||||.||.|||.|||.|.|.||.|| || ||| || ||||| |
RBAM_004310__ 675 GAAATTCGTCCGGATCACAGCAGAGGAGTA-CAGCCGC--ATCAAGGAGG 721
BSNT_00715___ 712 GAGTCCAATTGA 723
||| ||.|.|||
RBAM_004310__ 722 GAG-CCGAATGA 732
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