Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00709 and RBAM_004270

See DNA alignment / Visit BSNT_00709 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_00709___ycsE.1.9828.seq
#    -bsequence pep-align/RBAM_004270___ycsE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00709___ycsE-RBAM_004270___ycsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00709___ycsE-RBAM_004270___ycsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00709___ycsE
# 2: RBAM_004270___ycsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     212/249 (85.1%)
# Similarity:   237/249 (95.2%)
# Gaps:           0/249 ( 0.0%)
# Score: 1122.0
# 
#
#=======================================

BSNT_00709___      1 MSVQREDVDIKLIAIDMDGTLLNDEQLISDENRKAIREAEDKGVYVVIST     50
                     |.:||||.||||||||||||||||||||.:|||:||:|||.||::|||||
RBAM_004270__      1 MPIQREDADIKLIAIDMDGTLLNDEQLIPEENRRAIKEAEAKGIHVVIST     50

BSNT_00709___     51 GRTLMTCRELAESLKLSSFLITANGSEIWDSNFNLVERKLLHTDHIQMMW    100
                     ||||||||||||||:||||||||||||||||:|.|||||||||||||.:|
RBAM_004270__     51 GRTLMTCRELAESLELSSFLITANGSEIWDSDFELVERKLLHTDHIQKLW    100

BSNT_00709___    101 DLRNKHNTNFWASTVNKVWRGEFPENITDHEWLKFGFDIEDDDIRNEVLQ    150
                     |||||||||||||||::||||||||.||||:||||||:||||::|||||:
RBAM_004270__    101 DLRNKHNTNFWASTVDRVWRGEFPETITDHQWLKFGFEIEDDEVRNEVLK    150

BSNT_00709___    151 ELRKNKELEITNSSPTNIEVNALGINKAAALAKVTEKLGITMENVMAMGD    200
                     ||::.||||||||||.||||||||||||||||||:||||.||||||||||
RBAM_004270__    151 ELKEYKELEITNSSPINIEVNALGINKAAALAKVSEKLGFTMENVMAMGD    200

BSNT_00709___    201 SLNDIAMIKEAGLGVAMGNAQDIVKETADYITDTNIEDGVAKAIRHWVL    249
                     ||||||||::||:||||||||||||||||::||.|.|:|||||||||||
RBAM_004270__    201 SLNDIAMIEKAGVGVAMGNAQDIVKETADWVTDVNTENGVAKAIRHWVL    249


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