Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00696 and RBAM_004220

See DNA alignment / Visit BSNT_00696 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:27
# Commandline: needle
#    -asequence pep-align/BSNT_00696___ycnL.1.9828.seq
#    -bsequence pep-align/RBAM_004220___ycnL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00696___ycnL-RBAM_004220___ycnL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00696___ycnL-RBAM_004220___ycnL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00696___ycnL
# 2: RBAM_004220___ycnL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      75/117 (64.1%)
# Similarity:    91/117 (77.8%)
# Gaps:           4/117 ( 3.4%)
# Score: 411.0
# 
#
#=======================================

BSNT_00696___      1 MKETPCPNCGKPLTGDMVRSSNVPCQFRCGHCRERLYEYKVSAPIMLVSL     50
                     ||||.|||||||:||||||||.:||||:||||..:|.|||||||||..::
RBAM_004220__      1 MKETTCPNCGKPITGDMVRSSMIPCQFQCGHCHVKLREYKVSAPIMAAAI     50

BSNT_00696___     51 AAIVLLIYLLMLLRNAAGSVLPAVQHVPMAVFALVCAYPVFIVSERMIAK    100
                     |..||||||:.:.|.|...:.||.::||.|:|||||||||||||||:|||
RBAM_004220__     51 AITVLLIYLVQMARTAVMPMFPAARYVPAAIFALVCAYPVFIVSERLIAK    100

BSNT_00696___    101 YVIQNGNIIYRGKRKGS    117
                     .|:..|:||||.:    
RBAM_004220__    101 LVVTKGHIIYRKR----    113


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