Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00692 and RBAM_004190
See
DNA alignment /
Visit
BSNT_00692 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence pep-align/BSNT_00692___ycnI.1.9828.seq
# -bsequence pep-align/RBAM_004190___ycnI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00692___ycnI-RBAM_004190___ycnI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00692___ycnI-RBAM_004190___ycnI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00692___ycnI
# 2: RBAM_004190___ycnI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 158/204 (77.5%)
# Similarity: 174/204 (85.3%)
# Gaps: 1/204 ( 0.5%)
# Score: 799.0
#
#
#=======================================
BSNT_00692___ 1 MLKKIALTLCPAIVGSLLFFTAPASAHVSVKPAESAAGSWETYTIKVPSE 50
||||.||....|:..||:.|||.|||||||||||||||||||||:|||.|
RBAM_004190__ 1 MLKKKALLFISAVTLSLVGFTAAASAHVSVKPAESAAGSWETYTMKVPVE 50
BSNT_00692___ 51 KNLPTTKVVLKMPKDVEFQQYEPIPGWKVSTQKHDDKSVSVTWEATDGGI 100
||.||||||||||..||||||:||||||.|..|||||:|||||||.||||
RBAM_004190__ 51 KNEPTTKVVLKMPAGVEFQQYQPIPGWKTSVSKHDDKAVSVTWEAKDGGI 100
BSNT_00692___ 101 QEGQFQQFTFVAKNPDKAEEAAWDAYQYYKDGSIVEWTGDEDADTPHSIT 150
|.|||||||||||||:|:.:|||||||||||||||||||||.||||||||
RBAM_004190__ 101 QPGQFQQFTFVAKNPEKSGDAAWDAYQYYKDGSIVEWTGDEKADTPHSIT 150
BSNT_00692___ 151 NITSAKQVTDEHGATKTEDDSENSGSSALNITAIVLSAAAIILSVAALVK 200
.||.:..|||.|||.::.::|: ||.|||:|.||||||||||||:|||||
RBAM_004190__ 151 KITKSASVTDAHGAEQSNEESK-SGVSALDIAAIVLSAAAIILSIAALVK 199
BSNT_00692___ 201 KKRA 204
||||
RBAM_004190__ 200 KKRA 203
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.