Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00689 and RBAM_004170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence pep-align/BSNT_00689___glcU.1.9828.seq
# -bsequence pep-align/RBAM_004170___glcU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00689___glcU-RBAM_004170___glcU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00689___glcU-RBAM_004170___glcU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00689___glcU
# 2: RBAM_004170___glcU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity: 254/287 (88.5%)
# Similarity: 275/287 (95.8%)
# Gaps: 0/287 ( 0.0%)
# Score: 1295.0
#
#
#=======================================
BSNT_00689___ 1 MDLLLALLPALFWGSIVLFNVKLGGGPYSQTLGTTIGALIVSIVIYFFVQ 50
||:|||||||||||||||||||||||||||||||||||||||.|:|.||.
RBAM_004170__ 1 MDILLALLPALFWGSIVLFNVKLGGGPYSQTLGTTIGALIVSFVLYLFVH 50
BSNT_00689___ 51 PVLSLRIFIVGIVSGLFWSLGQANQLKSIQLMGVSKTMPISTGMQLVSTS 100
||||.|||||||:|||||||||:|||||||||||||||||||||||||||
RBAM_004170__ 51 PVLSGRIFIVGIISGLFWSLGQSNQLKSIQLMGVSKTMPISTGMQLVSTS 100
BSNT_00689___ 101 LFGVIVFREWSTPIAITLGVLALIFIIVGIILTSLEDKNDKKEGEPSNLK 150
|||||||:|||||||||||:|||||||:||:|||||||..:.:|||.|||
RBAM_004170__ 101 LFGVIVFKEWSTPIAITLGILALIFIIIGIVLTSLEDKKGRADGEPGNLK 150
BSNT_00689___ 151 KGILILLVSTLGYLVYVVVARLFNVSGWSALLPQAIGMVVGGLVLTYRHK 200
|||:|||:|||||||||||||||.|||||||||||||||:|||:|||:||
RBAM_004170__ 151 KGIVILLISTLGYLVYVVVARLFGVSGWSALLPQAIGMVIGGLLLTYKHK 200
BSNT_00689___ 201 PFNKYAIRNILPGLIWAGGNMFLFISQPRVGVATSFSLSQMGIVISTLGG 250
||||||::|||||:|||.||||||||||||||||||||||||||||||||
RBAM_004170__ 201 PFNKYALKNILPGIIWALGNMFLFISQPRVGVATSFSLSQMGIVISTLGG 250
BSNT_00689___ 251 IFILREKKTKRQLIAIAIGIILIIAAAVFLGIAKTNS 287
||||||.||||||:||||||||||.||||||:||:||
RBAM_004170__ 251 IFILRESKTKRQLVAIAIGIILIIVAAVFLGVAKSNS 287
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