Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00687 and RBAM_004160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence pep-align/BSNT_00687___gabD.1.9828.seq
# -bsequence pep-align/RBAM_004160___gabD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00687___gabD-RBAM_004160___gabD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00687___gabD-RBAM_004160___gabD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00687___gabD
# 2: RBAM_004160___gabD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 462
# Identity: 413/462 (89.4%)
# Similarity: 448/462 (97.0%)
# Gaps: 0/462 ( 0.0%)
# Score: 2194.0
#
#
#=======================================
BSNT_00687___ 1 MPDQLTVYNPATGEEIKTIPQQSAKEVEEAIERSHQAFKTWSKTSANERA 50
||:|||||||||||.|::||||:|::||:|||||||||::||||||.|||
RBAM_004160__ 1 MPEQLTVYNPATGEAIESIPQQTAEDVEKAIERSHQAFQSWSKTSAGERA 50
BSNT_00687___ 51 SLLKKWYELIVEHKEELADLITKENGKPYQEAVGEVLYGAGYIEWFAEEA 100
|||:||||||||:|||||:||||||||||:||||||||||||||||||||
RBAM_004160__ 51 SLLRKWYELIVENKEELAELITKENGKPYEEAVGEVLYGAGYIEWFAEEA 100
BSNT_00687___ 101 KRVYGRTVPAPTTGKRIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAA 150
||:|||||||||||||||||||.|||||||||||||||||||||||||||
RBAM_004160__ 101 KRIYGRTVPAPTTGKRIVVTRQAVGPVAAITPWNFPNAMITRKAAPALAA 150
BSNT_00687___ 151 GCTFIIKPAPDTPLSAYELARLAYEAGIPKDVLQVVIGDGEEIGNVFTSS 200
|||||||||.|||||||.||||||||||||||||||||||.|||||||||
RBAM_004160__ 151 GCTFIIKPAEDTPLSAYALARLAYEAGIPKDVLQVVIGDGAEIGNVFTSS 200
BSNT_00687___ 201 PKIRKITFTGSTPVGKILMKNSADTVKHVSMELGGHAPLIVDEDADIDLA 250
||||||||||||||||||||||||||||:|||||||||||||||||:|||
RBAM_004160__ 201 PKIRKITFTGSTPVGKILMKNSADTVKHMSMELGGHAPLIVDEDADLDLA 250
BSNT_00687___ 251 VEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLRVGNGLE 300
|.|.||||:||||||||||||||||||:|||||.||||:.:||:||||||
RBAM_004160__ 251 VAQTMASKFRNAGQTCVCANRLIVHESVKDEFAKKLSEEAAKLKVGNGLE 300
BSNT_00687___ 301 EGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGCYFVNP 350
:||||||:|||:||:|||.||:|||||||||:.|||||:||:||||||.|
RBAM_004160__ 301 KGVNVGPVINKKGFDKIVGQINDAVEKGAKVLTGGTYDQNDEKGCYFVTP 350
BSNT_00687___ 351 TVLTDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFT 400
|||::|||||||||||||||||||||||||||||:||||||:||||||||
RBAM_004160__ 351 TVLSNVDTSMNIMHEETFGPVAPIVTFSDIDEAIKLANDTPFGLAAYFFT 400
BSNT_00687___ 401 ENYRRGIYISENLEYGIIGWNDGGPSAVQAPFGGMKESGIGREGGSEGIE 450
|||||||||||.|||||||||||||||||||||||||||||||||:||||
RBAM_004160__ 401 ENYRRGIYISEQLEYGIIGWNDGGPSAVQAPFGGMKESGIGREGGTEGIE 450
BSNT_00687___ 451 PYLETKYLSIGL 462
|||||||:||||
RBAM_004160__ 451 PYLETKYMSIGL 462
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