Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00686 and RBAM_004150

See DNA alignment / Visit BSNT_00686 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_00686___gabT.1.9828.seq
#    -bsequence pep-align/RBAM_004150___gabT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00686___gabT-RBAM_004150___gabT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00686___gabT-RBAM_004150___gabT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00686___gabT
# 2: RBAM_004150___gabT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity:     359/436 (82.3%)
# Similarity:   380/436 (87.2%)
# Gaps:          33/436 ( 7.6%)
# Score: 1863.0
# 
#
#=======================================

BSNT_00686___      1 MSQTTVSITTAQWQQKRDQFVSKGVSNGNRSLAVKGEGAELYDLDGRRFI     50
                                                    :|||||||.||||||||||
RBAM_004150__      1 -------------------------------MAVKGEGALLYDLDGRRFI     19

BSNT_00686___     51 DFAGAIGTLNVGHSHPKVVEAVKRQAEELIHPGFNVMMYPTYIELAEKLC    100
                     |||||||||||||||||||||||:|||:||||||||||||:|||||||||
RBAM_004150__     20 DFAGAIGTLNVGHSHPKVVEAVKKQAEDLIHPGFNVMMYPSYIELAEKLC     69

BSNT_00686___    101 GIAPGSHEKKAIFLNSGAEAVENAVKIARRYTKRQGVVSFTRGFHGRTNM    150
                     .:|||.|.|||||||||||||||||||||:|||||.||||||||||||||
RBAM_004150__     70 ALAPGDHAKKAIFLNSGAEAVENAVKIARKYTKRQAVVSFTRGFHGRTNM    119

BSNT_00686___    151 TMSMTSKVKPYKFGFGPFAPEVYQAPFPYYYQKPAGMSDESYDDMVIQAF    200
                     |||||||||||||||||||.||||||||||||||||||||.|||.:|.||
RBAM_004150__    120 TMSMTSKVKPYKFGFGPFASEVYQAPFPYYYQKPAGMSDEQYDDFIISAF    169

BSNT_00686___    201 NDFFIASVAPETVACVVMEPVQGEGGFIIPSKRFVQHVASFCKEHGIVFV    250
                     .|||||:||||||||||||||||||||||||||||||||:||::||||||
RBAM_004150__    170 EDFFIAAVAPETVACVVMEPVQGEGGFIIPSKRFVQHVAAFCQKHGIVFV    219

BSNT_00686___    251 ADEIQTGFARTGTYFAIEHFDVVPDLITVSKSLAAGLPLSGVIGRAEMLD    300
                     ||||||||||||||||||||..||||||||||||||||||||||||||||
RBAM_004150__    220 ADEIQTGFARTGTYFAIEHFGAVPDLITVSKSLAAGLPLSGVIGRAEMLD    269

BSNT_00686___    301 AAAPGELGGTYAGSPLGCAAALAVLDIIEEEGLNERSEEIGKIIEDKAYE    350
                     ||||||||||||||||||||||||||||||||||:||||||:|||.:|.|
RBAM_004150__    270 AAAPGELGGTYAGSPLGCAAALAVLDIIEEEGLNQRSEEIGRIIEHQALE    319

BSNT_00686___    351 WKQEFPFIGDIRRLGAMAAIEIVKDPDTREPDKAKAAAIAAYANQNGLLL    400
                     ||:|...||::|||||||||||||||||||||||||||||..||:|||||
RBAM_004150__    320 WKKEHACIGEVRRLGAMAAIEIVKDPDTREPDKAKAAAIAKTANENGLLL    369

BSNT_00686___    401 LTAGINGNIIRFLTPLVISDSLLNEGLSILEAGLRA    436
                     |||||||||||||||||::|..|.|||||:||.|  
RBAM_004150__    370 LTAGINGNIIRFLTPLVVTDEQLKEGLSIIEAAL--    403


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