Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00686 and RBAM_004150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence dna-align/BSNT_00686___gabT.1.9828.seq
# -bsequence dna-align/RBAM_004150___gabT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00686___gabT-RBAM_004150___gabT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00686___gabT-RBAM_004150___gabT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00686___gabT
# 2: RBAM_004150___gabT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1330
# Identity: 963/1330 (72.4%)
# Similarity: 963/1330 (72.4%)
# Gaps: 137/1330 (10.3%)
# Score: 3686.0
#
#
#=======================================
BSNT_00686___ 1 ATGAGTCAAACAACAGTAAGCATAACAACTGCACAATGGCAGCAAAAACG 50
RBAM_004150__ 0 -------------------------------------------------- 0
BSNT_00686___ 51 GGATCAATTTGTGTCAAAAGGTGTGAGCAACGGCAACCGCAGTCTGGCGG 100
.||||||
RBAM_004150__ 1 -------------------------------------------ATGGCGG 7
BSNT_00686___ 101 TCAAAGGAGAAGGGGCCGAGC---TGTACGATCTGGATGGCCGGAGATTT 147
|.|||||.|||||||| || ||||||||.||||.|||.|..||||.
RBAM_004150__ 8 TAAAAGGGGAAGGGGC---GCTTTTGTACGATTTGGACGGCAGACGATTC 54
BSNT_00686___ 148 ATTGATTTTGCAGGCGCCATCGGCACGTTAAATGTCGGACACTCGCATCC 197
|||||||||||.||.||.|||||.|||.|.||||||||.||.||.|||||
RBAM_004150__ 55 ATTGATTTTGCCGGAGCGATCGGAACGCTGAATGTCGGCCATTCCCATCC 104
BSNT_00686___ 198 GAAGGTGGTTGAGGCTGTGAAGCGGCAGGCGGAGGAGCTGATTCATCCTG 247
|||.|||||.|||||.||||||...|||||||||||.||||||||.||.|
RBAM_004150__ 105 GAAAGTGGTGGAGGCCGTGAAGAAACAGGCGGAGGATCTGATTCACCCGG 154
BSNT_00686___ 248 GTTTTAATGTCATGATGTACCCGACTTATATCGAGTTAGCCGAAAAACTG 297
|.|||||.|||||||||||.|||.|||||||.|||.|.|||||||||||.
RBAM_004150__ 155 GATTTAACGTCATGATGTATCCGTCTTATATTGAGCTGGCCGAAAAACTT 204
BSNT_00686___ 298 TGTGGCATTGCACCGGGCAG-CCATGAGAAAAAAGCGATTTTTCTTAACT 346
||.|.|.||||.||||| || .||||.||||||||||||||||||.||.|
RBAM_004150__ 205 TGCGCCCTTGCGCCGGG-AGATCATGCGAAAAAAGCGATTTTTCTCAATT 253
BSNT_00686___ 347 CAGGGGCGGAAGCAGTCGAAAACGCTGTGAAAATCGCCAGAAGGTATACA 396
|.|||||||||||.||.||||||||.||||||||||||||||..||.||.
RBAM_004150__ 254 CGGGGGCGGAAGCGGTGGAAAACGCCGTGAAAATCGCCAGAAAATACACG 303
BSNT_00686___ 397 AAGCGCCAAGGC-GTTGTCTCGTTTACACGCGGGTTTCACGGGCGCACGA 445
||||||| |||| ||.||.||.||||||.|.|||||.|||||.|||||||
RBAM_004150__ 304 AAGCGCC-AGGCTGTCGTGTCATTTACAAGAGGGTTCCACGGCCGCACGA 352
BSNT_00686___ 446 ATATGACGATGAGCATGACAAGCAAGGTAAAACCTTATAAATTCGGTTTC 495
|.|||||||||||||||||.||||||||.||.||||||||||||||||||
RBAM_004150__ 353 ACATGACGATGAGCATGACGAGCAAGGTGAAGCCTTATAAATTCGGTTTC 402
BSNT_00686___ 496 GGACCTTTTGCGCCAGAGGTTTATCAAGCGCCGTTCCCTTATTATTATCA 545
||.||.|||||..|||||||.|||||.||||||||.|||||.||||||||
RBAM_004150__ 403 GGCCCGTTTGCCTCAGAGGTGTATCAGGCGCCGTTTCCTTACTATTATCA 452
BSNT_00686___ 546 GAAGCCGGCCGGCATGAGTGATGAAAGC--TATGACGATATGGTCATTCA 593
.|||||||||||||||||.||.| ||| ||||||||..|..||| |||
RBAM_004150__ 453 AAAGCCGGCCGGCATGAGCGACG--AGCAGTATGACGACTTTATCA-TCA 499
BSNT_00686___ 594 -AGCATTCAATGATTTCTTTATCGCTTCAGTGGCGCCTGAAACGGTGGCG 642
.||.||..|.||||||||||||||..||||.||.||.|||||.||.||.
RBAM_004150__ 500 GCGCTTTTGAGGATTTCTTTATCGCCGCAGTTGCACCGGAAACCGTCGCT 549
BSNT_00686___ 643 TGTGTCGTGATGGAGCCAGTGCAGGGAGAAGGCGGATTTATTATTCCTTC 692
||||||||.||||||||.||.||||||||||||||.||.||.|||||.||
RBAM_004150__ 550 TGTGTCGTCATGGAGCCGGTTCAGGGAGAAGGCGGCTTCATCATTCCGTC 599
BSNT_00686___ 693 GAAACGGTTCGTACAGCACGTCGCTTCATTCTG-CAAAGAACACGGCATT 741
.|||||.|||||.|||||||||||..|.||.|| |||| ||||||||||.
RBAM_004150__ 600 AAAACGTTTCGTCCAGCACGTCGCCGCTTTTTGTCAAA-AACACGGCATC 648
BSNT_00686___ 742 GTTTTTGTTGCTGATGAAATCCAAACCGGCTTTGCCAGAACTGGCACTTA 791
||||||||.||.|||||.||.||.|||||.|||||||||||.||.||.||
RBAM_004150__ 649 GTTTTTGTGGCGGATGAGATTCAGACCGGTTTTGCCAGAACGGGAACGTA 698
BSNT_00686___ 792 TTTCGCAATTGAGCACTTTGATGTAGTGCCCGATCTGATCACGGTTTCTA 841
|||.||.|||||.||.||.|..|..||.||.|||.|||||||.|||||.|
RBAM_004150__ 699 TTTTGCGATTGAACATTTCGGAGCCGTTCCTGATTTGATCACCGTTTCCA 748
BSNT_00686___ 842 AATCGCTTGCGGCAGGCCTGCCATTAAGCGGTGTGATTGGGCGTGCGGAA 891
||||.||||||||.||..||||..|.|||||.||.||.||.||.||||||
RBAM_004150__ 749 AATCACTTGCGGCCGGATTGCCGCTGAGCGGCGTCATCGGCCGGGCGGAA 798
BSNT_00686___ 892 ATGCTTGATGCGGCAGCGCCAGGGGAGCTGGGCGGCACGTATGCCGGCAG 941
|||||||||||.||.|||||.|||||.||.||.|||||.|||||.||.||
RBAM_004150__ 799 ATGCTTGATGCCGCCGCGCCGGGGGAACTCGGGGGCACATATGCGGGAAG 848
BSNT_00686___ 942 CCCGCTCGGCTGCGCGGCGGCTTTGGCAGTCTTGGATATTATTGAAGAAG 991
||||||||||||.|||||.||..|.||.||||||||||||||||||||||
RBAM_004150__ 849 CCCGCTCGGCTGTGCGGCTGCGCTTGCGGTCTTGGATATTATTGAAGAAG 898
BSNT_00686___ 992 AAGGACTGAATGAGCGATCTGAAGAAATTGGCAAAATCATTGAAGA-CAA 1040
||||.||||||.||||.||.||.||.||.|||...|||||.||..| |||
RBAM_004150__ 899 AAGGGCTGAATCAGCGTTCCGAGGAGATCGGCCGGATCATCGAGCATCAA 948
BSNT_00686___ 1041 GGCGTATGAGTGGAAACAAGA--ATTCCCGTTCATCGGTGACATCCGCAG 1088
|||...|||||||||.|||| ||.||.|| |||||.||..|.|||||
RBAM_004150__ 949 -GCGCTCGAGTGGAAAAAAGAGCATGCCTGT--ATCGGAGAAGTGCGCAG 995
BSNT_00686___ 1089 ACTCGGGGCGATGGCCGCAATCGAAATCGTCAAGGATCCTGACACGCGTG 1138
||||||.||||||||.||.||||||||.|||||.|||||.||||||||.|
RBAM_004150__ 996 ACTCGGCGCGATGGCGGCCATCGAAATTGTCAAAGATCCGGACACGCGGG 1045
BSNT_00686___ 1139 AGCCTGATAAGGCAAAAGCAGCAGCGATCGCGGCCTA---TGCGAATCAA 1185
|.||.||.||.||||||||.||.|||||| |||.| .|||||..|.
RBAM_004150__ 1046 AACCGGACAAAGCAAAAGCCGCGGCGATC---GCCAAAACGGCGAACGAG 1092
BSNT_00686___ 1186 AACGGATTACTTTTGCTGACAGCGGGAATTAACGGTAATATCATCCGCTT 1235
||||||.|.||..|||||||.||.||.||||||||.||.||.|||.|.||
RBAM_004150__ 1093 AACGGACTGCTGCTGCTGACGGCCGGCATTAACGGCAACATTATCAGATT 1142
BSNT_00686___ 1236 TTTGACACCGCTCGTCATCTCAGA----CAGCCTATTAAATGAAGGGCTC 1281
..||||.|||||.|||.|..|.|| |||| |.||.|||||.||.
RBAM_004150__ 1143 CCTGACGCCGCTTGTCGTGACGGATGAGCAGC----TCAAAGAAGGCCTT 1188
BSNT_00686___ 1282 AGCATCTTGGAGGCGGGCCTGCGAGCTTAA 1311
..|||..|.||.||.|..|||.||
RBAM_004150__ 1189 TCCATTATCGAAGCAGCTCTGTGA------ 1212
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