Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00682 and RBAM_004120

See DNA alignment / Visit BSNT_00682 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_00682___ycnE.1.9828.seq
#    -bsequence pep-align/RBAM_004120___ycnE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00682___ycnE-RBAM_004120___ycnE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00682___ycnE-RBAM_004120___ycnE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00682___ycnE
# 2: RBAM_004120___ycnE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 95
# Identity:      83/95 (87.4%)
# Similarity:    87/95 (91.6%)
# Gaps:           0/95 ( 0.0%)
# Score: 421.0
# 
#
#=======================================

BSNT_00682___      1 MIVLQAYIKVKPEKREEFLSEAQSLVQHSRAEEGNAQYDLFEKVGEENTF     50
                     |||||||:|||.:||||||.|||||||||||||||.||||||||||||||
RBAM_004120__      1 MIVLQAYMKVKADKREEFLGEAQSLVQHSRAEEGNVQYDLFEKVGEENTF     50

BSNT_00682___     51 VMLEKWKDEAAMKFHNETAHFQGFVAKGKELLSAPLDVVRTELSE     95
                     ||||:||||.|||.||.|.||||||||.||:||||||||||||||
RBAM_004120__     51 VMLEQWKDEEAMKSHNATDHFQGFVAKAKEVLSAPLDVVRTELSE     95


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