Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00679 and RBAM_004090
See
DNA alignment /
Visit
BSNT_00679 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence pep-align/BSNT_00679___ycnB.1.9828.seq
# -bsequence pep-align/RBAM_004090___ycnB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00679___ycnB-RBAM_004090___ycnB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00679___ycnB-RBAM_004090___ycnB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00679___ycnB
# 2: RBAM_004090___ycnB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity: 402/474 (84.8%)
# Similarity: 431/474 (90.9%)
# Gaps: 2/474 ( 0.4%)
# Score: 2021.0
#
#
#=======================================
BSNT_00679___ 1 MNTSIEQKPFNRSVIVGILLAGAFVAILNQTLLITALPHIMRDFNVDANQ 50
||.|||..|:|||||||||||||||||||||||||||||||.|||:|||:
RBAM_004090__ 1 MNKSIETAPYNRSVIVGILLAGAFVAILNQTLLITALPHIMNDFNIDANK 50
BSNT_00679___ 51 AQWLTTSFMLTNGILIPITAFLIEKFTSRALLITAMSIFTAGTVVGAFAP 100
|||||||||||||||||||||||||||||.|||:|||||||||:||||||
RBAM_004090__ 51 AQWLTTSFMLTNGILIPITAFLIEKFTSRTLLISAMSIFTAGTIVGAFAP 100
BSNT_00679___ 101 NFPVLLTARIIQAAGAGIMMPLMQTVFLTIFPIEKRGQAMGMVGLVISFA 150
|||||||||||||||||||:||||||||||||:||||:||||||||||||
RBAM_004090__ 101 NFPVLLTARIIQAAGAGIMLPLMQTVFLTIFPMEKRGRAMGMVGLVISFA 150
BSNT_00679___ 151 PAIGPTLSGWAVEAFSWRSLFYIILPFAVIDLILASILMKNVTTLRKTQI 200
||||||||||||||||||||||||.|.|||||:||.||||||||||:|||
RBAM_004090__ 151 PAIGPTLSGWAVEAFSWRSLFYIIFPIAVIDLLLAIILMKNVTTLRETQI 200
BSNT_00679___ 201 DILSVILSTFGFGGLLYGFSSVGSYGWSSSTVLISLLVGVIALLLFITRQ 250
|||||||||.|||||||||||.||.||:|:.||.|||||.:||:.||.||
RBAM_004090__ 201 DILSVILSTLGFGGLLYGFSSAGSSGWTSAEVLTSLLVGAVALIFFIARQ 250
BSNT_00679___ 251 MKLEKPMLEFRVFTFGVFSLTTLLGTLVFALLIGTETILPLYTQNVRDVT 300
|||:|||||||||:||:|||||||||||||||||||||||||||.||.|:
RBAM_004090__ 251 MKLKKPMLEFRVFSFGIFSLTTLLGTLVFALLIGTETILPLYTQKVRGVS 300
BSNT_00679___ 301 AFDTGLMLLPGAVVMGFMSPIIGRIFDRVGGRGLAIAGFCIIFLTSLPFM 350
||||||||||||:|||.|||.|||:||::||:|||:.||.||.|||||||
RBAM_004090__ 301 AFDTGLMLLPGAIVMGMMSPFIGRVFDKIGGKGLAMTGFFIILLTSLPFM 350
BSNT_00679___ 351 QLTDHTSLAWIVVLYTVRLLGTAMIMMPVTTAGINALPRHLIPHGTAMNN 400
.|||.|||.||||:||.|||||||||||||||||||||||||||||||||
RBAM_004090__ 351 NLTDSTSLIWIVVVYTARLLGTAMIMMPVTTAGINALPRHLIPHGTAMNN 400
BSNT_00679___ 401 TIRQVGGSIGTALLVSVMSNQAAHAGTTNVKHAALHGMNAAFIVAAVIAL 450
|:|||||||||||||||||:|||||..|...:||||||||||:|||.|||
RBAM_004090__ 401 TVRQVGGSIGTALLVSVMSSQAAHANATTPANAALHGMNAAFVVAACIAL 450
BSNT_00679___ 451 VGFLLSFTLKKPQRPAEQQPAR-- 472
.||||||.|||..|..|||.|.
RBAM_004090__ 451 AGFLLSFILKKKPRQPEQQQAVTR 474
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.