Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00676 and RBAM_004070

See DNA alignment / Visit BSNT_00676 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_00676___yclP.1.9828.seq
#    -bsequence pep-align/RBAM_004070___yclP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00676___yclP-RBAM_004070___yclP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00676___yclP-RBAM_004070___yclP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00676___yclP
# 2: RBAM_004070___yclP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     220/252 (87.3%)
# Similarity:   243/252 (96.4%)
# Gaps:           0/252 ( 0.0%)
# Score: 1148.0
# 
#
#=======================================

BSNT_00676___      1 MVEVRNVSKQYGGKVVLEETSVTIQKGKITSFIGPNGAGKSTLLSIMSRL     50
                     ||||:|||||||||.|||:||::||||::|||||||||||||||||||||
RBAM_004070__      1 MVEVKNVSKQYGGKTVLEKTSLSIQKGRLTSFIGPNGAGKSTLLSIMSRL     50

BSNT_00676___     51 IKKDSGEIYIDGQEIGACDSKELAKKMSILKQANQINIRLTIKDLVSFGR    100
                     ||.|||||.:||||||||.|.:||||:|||||.|||||||||||||||||
RBAM_004070__     51 IKTDSGEITVDGQEIGACKSNDLAKKISILKQTNQINIRLTIKDLVSFGR    100

BSNT_00676___    101 FPYSQGRLTEEDWVHINQALSYMKLEDIQDKYLDQLSGGQCQRAFIAMVI    150
                     ||||||:||:|||||||||||||||::::|||||||||||||||||||:|
RBAM_004070__    101 FPYSQGKLTDEDWVHINQALSYMKLDELKDKYLDQLSGGQCQRAFIAMII    150

BSNT_00676___    151 AQDTDYIFLDEPLNNLDMKHSVEIMKLLKRLVEELGKTIVIVIHDINFAS    200
                     |||||||||||||||||||||||:|||||||||:.|||:|:|||||||||
RBAM_004070__    151 AQDTDYIFLDEPLNNLDMKHSVEMMKLLKRLVEDFGKTVVVVIHDINFAS    200

BSNT_00676___    201 VYSDHIVALKNGRIVKEGPPEEMIETSVLEEIYDMTIPIQTIDNQRIGVY    250
                     |||||||||||||||||||.||:|||||||:|||||||||.||:||||||
RBAM_004070__    201 VYSDHIVALKNGRIVKEGPAEEIIETSVLEDIYDMTIPIQEIDSQRIGVY    250

BSNT_00676___    251 FS    252
                     ||
RBAM_004070__    251 FS    252


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