Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00676 and RBAM_004070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence dna-align/BSNT_00676___yclP.1.9828.seq
# -bsequence dna-align/RBAM_004070___yclP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00676___yclP-RBAM_004070___yclP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00676___yclP-RBAM_004070___yclP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00676___yclP
# 2: RBAM_004070___yclP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 763
# Identity: 623/763 (81.7%)
# Similarity: 623/763 (81.7%)
# Gaps: 8/763 ( 1.0%)
# Score: 2507.0
#
#
#=======================================
BSNT_00676___ 1 ATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCGGGAAAGTTGTTCT 50
|||||||||||||.||||||||||||||||||.||.||||||...||.||
RBAM_004070__ 1 ATGGTAGAGGTCAAAAATGTAAGCAAACAATACGGAGGGAAAACCGTCCT 50
BSNT_00676___ 51 TGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTATCG 100
|||..|.|||||..|..|.|||||||||||||...|||||||.|||||||
RBAM_004070__ 51 TGAGAAAACGTCTCTATCCATTCAAAAGGGCAGGCTCACCTCATTTATCG 100
BSNT_00676___ 101 GTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGCCTG 150
||||.||||||||.||.|||||.|||||||||||||||||||||||.|||
RBAM_004070__ 101 GTCCGAACGGCGCGGGAAAAAGCACGCTGCTGTCTATCATGAGCCGGCTG 150
BSNT_00676___ 151 ATCAAAAAGGATTCCGGCGAGATTTAC-ATAGACGGACAAGAGATTGGAG 199
||.||.|.|||||||||.|| |.|||| .|.|||||.||||||||.||.|
RBAM_004070__ 151 ATTAAGACGGATTCCGGGGA-AATTACGGTCGACGGGCAAGAGATCGGGG 199
BSNT_00676___ 200 CATGTGACAGTAAAGAGCTTGCCAAGAAAATGAGCATTTTGAAGCAGGCG 249
|.||..|.||.||.||.||.||.||.|||||.|||||..||||||||.||
RBAM_004070__ 200 CCTGCAAAAGCAACGATCTGGCAAAAAAAATCAGCATCCTGAAGCAGACG 249
BSNT_00676___ 250 AACCAAATCAATATCAGGCTCACGATCAAAGACCTCGTCAGTTTTGGCAG 299
||||||||||||||||||||.|||||.||||||||.|||||.||.|||||
RBAM_004070__ 250 AACCAAATCAATATCAGGCTGACGATTAAAGACCTGGTCAGCTTCGGCAG 299
BSNT_00676___ 300 GTTTCCGTACTCACAGGGCCGGCTGACAGAGGAAGACTGGGTTCATATCA 349
.||||||||.||.|||||....|||||.||.|||||.|||||.|||||||
RBAM_004070__ 300 ATTTCCGTATTCCCAGGGGAAACTGACGGATGAAGATTGGGTGCATATCA 349
BSNT_00676___ 350 ACCAGGCGCTCAGCTATATGAAGCTGGAAGACATTCAA-GACAAATACTT 398
|||||||.|||||.||||||||||||||.|| |||.|| ||.||||||.|
RBAM_004070__ 350 ACCAGGCCCTCAGTTATATGAAGCTGGATGA-ATTAAAGGATAAATACCT 398
BSNT_00676___ 399 GGATCAGCTGAGCGGCGGACAGTGCCAAAGGGCATTTATCGCCATGGTCA 448
.||||||||.|||||.||.||||||||.|||||.||||||||.|||.|||
RBAM_004070__ 399 CGATCAGCTCAGCGGAGGCCAGTGCCAGAGGGCGTTTATCGCGATGATCA 448
BSNT_00676___ 449 TTGCCCAGGACACAGATTATATTTTTCTGGATGAGCCGCTGAACAATCTG 498
|.||.|||||.||.||.|||||||||||.||||||||||||||||||.|.
RBAM_004070__ 449 TCGCTCAGGATACGGACTATATTTTTCTCGATGAGCCGCTGAACAATTTA 498
BSNT_00676___ 499 GATATGAAACACTCAGTTGAAATTATGAAACTGCTGAAACGGCTGGTAGA 548
||||||||.||.||.||||||||.|||||.|||.||||.|||||.||.||
RBAM_004070__ 499 GATATGAAGCATTCCGTTGAAATGATGAAGCTGTTGAAGCGGCTTGTGGA 548
BSNT_00676___ 549 GGAGCTT-GGAAAAACGATCGTCATCGTTATTCACGATATCAATTTTGCT 597
.|| ||| |||||||||.|||||.|.||.||||||||||||||.||.||.
RBAM_004070__ 549 AGA-CTTCGGAAAAACGGTCGTCGTAGTGATTCACGATATCAACTTCGCA 597
BSNT_00676___ 598 TCAGTCTATTCTGACCATATCGTCGCTTTGAAAAACGGCCGAATCGTAAA 647
||.||.|||||.||||||||||||||..|||||||||||||.|||||.||
RBAM_004070__ 598 TCCGTATATTCAGACCATATCGTCGCACTGAAAAACGGCCGGATCGTCAA 647
BSNT_00676___ 648 AGAAGGACCACCTGAAGAAATGATAGAAACATCAGTGCTTGAGGAAATCT 697
||||||.||..|.||.||.||.||.|||||.||.||||||||.||.||.|
RBAM_004070__ 648 AGAAGGGCCGGCGGAGGAGATCATTGAAACCTCCGTGCTTGAAGATATTT 697
BSNT_00676___ 698 ACGATATGACCATCCCGATTC-AGACGATTGATAATCAAAGAATAGGTGT 746
|.||||||||||||||||||| ||| ||||||.|.|||..|.||.|||||
RBAM_004070__ 698 ATGATATGACCATCCCGATTCAAGA-GATTGACAGTCAGCGGATCGGTGT 746
BSNT_00676___ 747 CTATTTTTCTTAA 759
.||.|||||||||
RBAM_004070__ 747 GTACTTTTCTTAA 759
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