Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00668 and RBAM_004010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence pep-align/BSNT_00668___rapC.1.9828.seq
# -bsequence pep-align/RBAM_004010___rapC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00668___rapC-RBAM_004010___rapC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00668___rapC-RBAM_004010___rapC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00668___rapC
# 2: RBAM_004010___rapC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 382
# Identity: 316/382 (82.7%)
# Similarity: 352/382 (92.1%)
# Gaps: 0/382 ( 0.0%)
# Score: 1673.0
#
#
#=======================================
BSNT_00668___ 1 MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNL 50
||||:||||||||||||||||||||||||||:|||||:|||.||:.||||
RBAM_004010__ 1 MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNL 50
BSNT_00668___ 51 LLYYSLMEFRHQLMLDYLEPLEKLNIEDQPSLSELSRNIDSNQADLKGLL 100
:|||||||||||||||||||||||.|||||:|||:..|||::||.|||||
RBAM_004010__ 51 VLYYSLMEFRHQLMLDYLEPLEKLKIEDQPTLSEILDNIDNSQAGLKGLL 100
BSNT_00668___ 101 DYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAE 150
|||||||:||:|||||||||||||||||||||:||:||:||||||||:||
RBAM_004010__ 101 DYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAE 150
BSNT_00668___ 151 AYYYMKQTYFSLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFE 200
|||:|||||||||:|||||||||||:|||||||||||||||||||||.||
RBAM_004010__ 151 AYYHMKQTYFSLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFE 200
BSNT_00668___ 201 QAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLDPAIDYFEKAV 250
|||:||:.||.||:.||||||||||.|||||||||||.:..||.|||:||
RBAM_004010__ 201 QAAKHFQHALQMAEKEQKAQLVGRAQYNLGLCYYNQDRIGEAIPYFERAV 250
BSNT_00668___ 251 STFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDAD 300
.||||.|||||||||||||||||:|.||.:||||||||||||||||||..
RBAM_004010__ 251 DTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPV 300
BSNT_00668___ 301 YAVKFEFLQSLYQDQPNEEGIERCFQYLKNKNMYADIEDLALEVAKYYYE 350
|.||||:||:|||.:|:||.|..||:||::||:||||||||||.||||||
RBAM_004010__ 301 YTVKFEWLQALYQAKPDEETISACFRYLEDKNLYADIEDLALEAAKYYYE 350
BSNT_00668___ 351 QKWFKLSASYFLQVEEARKQIQRSEGLYEIEI 382
|..||:|:.|||:|||||||||||||||||||
RBAM_004010__ 351 QNCFKISSDYFLKVEEARKQIQRSEGLYEIEI 382
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