Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00667 and RBAM_004000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence pep-align/BSNT_00667___yclK.1.9828.seq
# -bsequence pep-align/RBAM_004000___yclK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00667___yclK-RBAM_004000___yclK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00667___yclK-RBAM_004000___yclK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00667___yclK
# 2: RBAM_004000___yclK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 478
# Identity: 369/478 (77.2%)
# Similarity: 421/478 (88.1%)
# Gaps: 8/478 ( 1.7%)
# Score: 1885.5
#
#
#=======================================
BSNT_00667___ 1 MKIKYLYQLLLSHISILILAFVIIISLFSHFVKEFAYQNKVEELTSYAVQ 50
|:|||||||||||:|||||||.|||||||||||:|||||||:||:|||.|
RBAM_004000__ 1 MRIKYLYQLLLSHVSILILAFFIIISLFSHFVKDFAYQNKVDELSSYAQQ 50
BSNT_00667___ 51 IANEFQAGQVDMRRLYPYQDMLSTRKTQFIIFNEEQQPYFLPEGFHHPPR 100
|.:|.....:|:||||||||||.||:|:||||:|.|:|||.|:.. |||
RBAM_004000__ 51 ITSELNGRDLDLRRLYPYQDMLKTRETRFIIFDEHQRPYFFPDDM--PPR 98
BSNT_00667___ 101 EQLKKSEWNKLKKGQTVMIRAD-GRFDD---EVSLVAQPIFVQNEFKGAV 146
|:||..||:.||:|:||.|||: .||:. ||||||:|:|:.::|||||
RBAM_004000__ 99 EKLKSKEWHMLKQGKTVQIRAEMNRFNTEGLEVSLVAKPLFINDQFKGAV 148
BSNT_00667___ 147 LLISPISGVEQMVNQVNLYMFYAVISTLVITILVSWLLSKFHVKRIQKLR 196
||:||:.|||||::|||.||.||:||||:||||:|||||||||||||.||
RBAM_004000__ 149 LLVSPVRGVEQMISQVNRYMIYAIISTLIITILLSWLLSKFHVKRIQTLR 198
BSNT_00667___ 197 EATDKVASGDYDIHLENSYGDEIGVLASDFNIMAKKLKQSRDEIERLEKR 246
:||.|||||||||.|:||.|||||:||||||.|||.|||||::|:|||||
RBAM_004000__ 199 DATGKVASGDYDISLKNSGGDEIGMLASDFNTMAKNLKQSREQIDRLEKR 248
BSNT_00667___ 247 RRQFIADVSHELKTPLTTINGLVEGLNSHTIPEDKKDKCFSLISEETKRM 296
||||||||||||:|||||||||||||||:||||..|:|||||||||||||
RBAM_004000__ 249 RRQFIADVSHELRTPLTTINGLVEGLNSNTIPEKDKEKCFSLISEETKRM 298
BSNT_00667___ 297 LRLVKENLDYEKIRSQQITLNKLDVPLIEVFEIVKEHLQQQAEEKQNKLM 346
||||||||||||||||||.|:||.:||||||||:||||.||||||||:|.
RBAM_004000__ 299 LRLVKENLDYEKIRSQQIKLDKLSLPLIEVFEIIKEHLNQQAEEKQNQLR 348
BSNT_00667___ 347 IQVEDHVIVHADYDRFIQILVNITKNSIQFTQNGDIWLRGMEGYKETIIE 396
|||||.|.|.|||||.||||||||||||||||.|||.|||.||||||:||
RBAM_004000__ 349 IQVEDGVKVFADYDRLIQILVNITKNSIQFTQKGDITLRGYEGYKETVIE 398
BSNT_00667___ 397 IEDTGIGIPKEDIEHIWERFYKADISRTNTAYGEYGLGLSIVRQLVEMHQ 446
||||||||.||:||||||||||||:||||||||||||||||||||||||:
RBAM_004000__ 399 IEDTGIGISKEEIEHIWERFYKADVSRTNTAYGEYGLGLSIVRQLVEMHK 448
BSNT_00667___ 447 GTVEIKSEEGKGTKFIIRLPLTAKQQ-- 472
||::|.||:||||.|.|||||..|.:
RBAM_004000__ 449 GTIDIDSEKGKGTTFTIRLPLNTKHESS 476
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