Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00666 and RBAM_003990

See DNA alignment / Visit BSNT_00666 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_00666.1.9828.seq
#    -bsequence pep-align/RBAM_003990___yclJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00666-RBAM_003990___yclJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00666-RBAM_003990___yclJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00666
# 2: RBAM_003990___yclJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     207/289 (71.6%)
# Similarity:   222/289 (76.8%)
# Gaps:          62/289 (21.5%)
# Score: 1107.0
# 
#
#=======================================

BSNT_00666         1 MDKTASGARPLADKLIVVQRYEKNMNNLFLVDEIKTNNCETQNLLFKMVL     50
                                                                       
RBAM_003990__      0 --------------------------------------------------      0

BSNT_00666        51 LYKKASKQPEDIMKILMIEDNVSVCTMTEMFFFKEGFEAEFVHDGLEGYQ    100
                                 |||||||||:|||||||||||||||||||||||:||||
RBAM_003990__      1 ------------MKILMIEDNISVCTMTEMFFFKEGFEAEFVHDGVEGYQ     38

BSNT_00666       101 RFTEENWDLIILDIMLPSMDGVTICRKIRETSTVPIIMLTAKDTESDQVI    150
                     |||||:|||:||||||||||||||||||||||:|||||||||||||||||
RBAM_003990__     39 RFTEEDWDLVILDIMLPSMDGVTICRKIRETSSVPIIMLTAKDTESDQVI     88

BSNT_00666       151 GFEMGADDYVTKPFSPLTLVARIKAVIRRYKATGKAVIDEDMIETECFTI    200
                     ||||||||||||||||||||||||||||||:|||:||..:|:|||.||:|
RBAM_003990__     89 GFEMGADDYVTKPFSPLTLVARIKAVIRRYRATGQAVKSDDLIETACFSI    138

BSNT_00666       201 NKKTREVLLNGEPVENLTPKEFDLLYYLVQNPRQVFSREQLLEQVWGYQF    250
                     |||||||.|:|:|||||||||||||:||.|||||||||||||||||||||
RBAM_003990__    139 NKKTREVFLHGKPVENLTPKEFDLLFYLAQNPRQVFSREQLLEQVWGYQF    188

BSNT_00666       251 YGDERTVDVHIKRLRKKLASEDKPFLYTVWGVGYKFDED    289
                     ||||||||||||||||||:||:|||||||||||||||||
RBAM_003990__    189 YGDERTVDVHIKRLRKKLSSEEKPFLYTVWGVGYKFDED    227


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