Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00664 and RBAM_003970

See DNA alignment / Visit BSNT_00664 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence pep-align/BSNT_00664___yclH.1.9828.seq
#    -bsequence pep-align/RBAM_003970___yclH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00664___yclH-RBAM_003970___yclH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00664___yclH-RBAM_003970___yclH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00664___yclH
# 2: RBAM_003970___yclH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity:     192/227 (84.6%)
# Similarity:   208/227 (91.6%)
# Gaps:           1/227 ( 0.4%)
# Score: 996.0
# 
#
#=======================================

BSNT_00664___      1 MSLLEFQQVGYWYKDKSQPLFQDINISFQKGKFYTIVGTSGTGKTTFLSL     50
                     ||||.|||.||||:||||||||||.|||:|||||||||.|||||||||||
RBAM_003970__      1 MSLLTFQQTGYWYQDKSQPLFQDITISFEKGKFYTIVGASGTGKTTFLSL     50

BSNT_00664___     51 ASGLDAPKEGNILYDGKAVSKIGLTNFRNQYVSIVFQAYNLLPYMTALQN    100
                     |.|||.||||:|||:|:.:||||||.|||||||||||:|:|:||||||||
RBAM_003970__     51 AGGLDTPKEGSILYNGEDISKIGLTKFRNQYVSIVFQSYHLIPYMTALQN    100

BSNT_00664___    101 VTTAMEITGSKEKNKESYALDMLQKVGINEKQARQKVLTLSGGQQQRVSI    150
                     ||||||||||||.||:::||.||:||||.|:||||:||||||||||||||
RBAM_003970__    101 VTTAMEITGSKENNKDAFALSMLKKVGITEQQARQRVLTLSGGQQQRVSI    150

BSNT_00664___    151 TRAFCCDTDLIVADEPTGNLDEDTSKEIVRLFQDLAHKENKCVIMVTHDE    200
                     .||||||||||.||||||||||||||||||||||||||..||:|||||||
RBAM_003970__    151 ARAFCCDTDLICADEPTGNLDEDTSKEIVRLFQDLAHKGGKCIIMVTHDE    200

BSNT_00664___    201 QIAKVSDINIRLSRGSFTVKENVAVV-    226
                     ||||||||||||||||||||||...| 
RBAM_003970__    201 QIAKVSDINIRLSRGSFTVKENGTAVS    227


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