Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06056 and RBAM_003960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:32
# Commandline: needle
# -asequence pep-align/BSNT_06056___yxeQ.1.9828.seq
# -bsequence pep-align/RBAM_003960___yxeQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06056___yxeQ-RBAM_003960___yxeQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06056___yxeQ-RBAM_003960___yxeQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06056___yxeQ
# 2: RBAM_003960___yxeQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 449
# Identity: 294/449 (65.5%)
# Similarity: 358/449 (79.7%)
# Gaps: 5/449 ( 1.1%)
# Score: 1548.0
#
#
#=======================================
BSNT_06056___ 1 MSKQGLTAGLAEAVRTSQPEHSVDAIHEAKKGLLDFTAASFAGREDKGIQ 50
|:.:.||||||:||.:|.||.|.:|:.||:||||||:||:||||.|||::
RBAM_003960__ 1 MNTENLTAGLAQAVMSSVPETSAEAMKEARKGLLDFSAAAFAGRRDKGVE 50
BSNT_06056___ 51 KLLRLIEDEGGLPLVPIIGQGKKAAPLQSAMLNGFIAHALDFDDVHSDVR 100
||::|.|:|||:|:.|:||:.:|..|.|:|::||||||||||||||||||
RBAM_003960__ 51 KLVKLAEEEGGVPIAPLIGRNQKTTPSQAALINGFIAHALDFDDVHSDVR 100
BSNT_06056___ 101 GHPSAVIVPALIASAARGH--DERLLGAYVVGVEVMARLGESIGSRHYEK 148
|||||||:|||||:|:.|. ..|.|||||.|:|||||||||.|..||||
RBAM_003960__ 101 GHPSAVILPALIAAASAGRIDKSRFLGAYVTGIEVMARLGESAGRHHYEK 150
BSNT_06056___ 149 GWHNTGTLGAIAAACAVGYAEELTQEELEKAIGFAATQSAGMRVQFGTEM 198
||||||||||||||||||:||.|.|.:|:.||||||.:|.||||||||||
RBAM_003960__ 151 GWHNTGTLGAIAAACAVGFAENLNQTQLQTAIGFAAARSGGMRVQFGTEM 200
BSNT_06056___ 199 KPLHAGLAAQAGLLAVKLAQSEFGGSRTALDGETGFFSLYGDVEKAQHTL 248
|||||||||||||.||:||::.||||..|||||.|||.||||:|:|:..|
RBAM_003960__ 201 KPLHAGLAAQAGLFAVQLAKAGFGGSVHALDGEKGFFGLYGDLERAETLL 250
BSNT_06056___ 249 LNDWGAPWRIVQPGLWFKIYPFCSAAHHAADAVRQLISEETISAANTERI 298
:|.||.|||||.||||||:|||||||||||||:.:|.:|..::...||||
RBAM_003960__ 251 VNGWGKPWRIVSPGLWFKVYPFCSAAHHAADAILKLKAEHGLTFGQTERI 300
BSNT_06056___ 299 EVIFPPGGDAALTERSPKTGEEGRFSVEYVIALALHGHDLTIEHFNSQPI 348
:||:|||||||||||.|||||.|||||||||.|||||.|.::|||.|:||
RBAM_003960__ 301 DVIYPPGGDAALTERRPKTGEAGRFSVEYVITLALHGKDFSVEHFTSEPI 350
BSNT_06056___ 349 PNGIQTTIGHIQRVYDNATQPAPHAVPKGRFTIVRAYLSDGRICEARVDC 398
|..:|.....|.|..|:..|||.:|||||||||||...|.|.:.|.|:||
RBAM_003960__ 351 PESLQKGFERIHRSCDDQIQPADNAVPKGRFTIVRVTASGGHVYETRIDC 400
BSNT_06056___ 399 PKGAPGNELSEEDIIEKLILTVP--QEKARRIITSVEKADIKEFLAHIE 445
|||||||.|||:||.:||.|.:| ::||..:|.:..:::|..:|..|
RBAM_003960__ 401 PKGAPGNGLSEKDIEDKLRLALPGEEKKAEELIKAAGQSNIDRYLQLI- 448
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