Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06061 and RBAM_003910

See DNA alignment / Visit BSNT_06061 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:33
# Commandline: needle
#    -asequence pep-align/BSNT_06061___yxeL.1.9828.seq
#    -bsequence pep-align/RBAM_003910___yxeL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06061___yxeL-RBAM_003910___yxeL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06061___yxeL-RBAM_003910___yxeL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06061___yxeL
# 2: RBAM_003910___yxeL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     128/165 (77.6%)
# Similarity:   146/165 (88.5%)
# Gaps:           2/165 ( 1.2%)
# Score: 710.0
# 
#
#=======================================

BSNT_06061___      1 MKPQYRLAVERDAEQLLALTLRAYEPIRKLGIRFAAAHADLDLVLQNIRE     50
                     |..|||||.|.||::||:||||||||||||||.||||.||.:|||.||::
RBAM_003910__      1 MSRQYRLATEADADELLSLTLRAYEPIRKLGINFAAATADKELVLNNIQK     50

BSNT_06061___     51 NACYVMEEDGRIIATITLRMPWGKQPGPYGVPHIWWFAVDPGTGKKGIGT    100
                     |||||:||||||:|||:||||||..||||||||||||||||.|||||.|:
RBAM_003910__     51 NACYVLEEDGRILATISLRMPWGPNPGPYGVPHIWWFAVDPETGKKGTGS    100

BSNT_06061___    101 KLLQWLEETILRDTLKVPFVSLGTADKHPWLIEMYERKGYVRSGEQDLGK    150
                     .:|:|||.|:||||||.|||||||||||||||.|||||||||:||:||||
RBAM_003910__    101 DMLEWLENTVLRDTLKAPFVSLGTADKHPWLIGMYERKGYVRAGEKDLGK    150

BSNT_06061___    151 GHITVYMKKQLRHDL    165
                     ||||:|:||||:.  
RBAM_003910__    151 GHITIYLKKQLQD--    163


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