Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06061 and RBAM_003910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:33
# Commandline: needle
# -asequence dna-align/BSNT_06061___yxeL.1.9828.seq
# -bsequence dna-align/RBAM_003910___yxeL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06061___yxeL-RBAM_003910___yxeL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06061___yxeL-RBAM_003910___yxeL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06061___yxeL
# 2: RBAM_003910___yxeL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 513
# Identity: 360/513 (70.2%)
# Similarity: 360/513 (70.2%)
# Gaps: 36/513 ( 7.0%)
# Score: 1209.5
#
#
#=======================================
BSNT_06061___ 1 ATG--AAGCCACAATATCGCCTTGCAGTTGA-----ACG-TGATGCCGAA 42
||| ||| ||||||.||.||.|||...|| ||| |||||
RBAM_003910__ 1 ATGTCAAG--ACAATACCGGCTCGCAACGGAGGCAGACGCTGATG----- 43
BSNT_06061___ 43 CAGCTCCTCGCGCTGACATTGCGGGCTTATGAACCGATTCGAAAGCTTGG 92
||||.||..|.||||||.|||||||.|||||||||||.||.|||||.||
RBAM_003910__ 44 -AGCTGCTTTCACTGACACTGCGGGCGTATGAACCGATCCGCAAGCTCGG 92
BSNT_06061___ 93 CATTCGTTTTGCTGCCGCTCA-TGCAGATTTGGATTTGGTGCTGCAAAAT 141
|||....|||||.||.|| || .||.|||...||..|.||..||.|.||.
RBAM_003910__ 93 CATCAACTTTGCCGCTGC-CACGGCGGATAAAGAACTCGTTTTGAATAAC 141
BSNT_06061___ 142 ATTCGGGAAAATGCTTGCTACGTCATGGAAGAAGACGGGCGGATCATCGC 191
||.|...|||||||.||.|||||..||||.||||||||.|||||..|.||
RBAM_003910__ 142 ATACAAAAAAATGCCTGTTACGTTTTGGAGGAAGACGGCCGGATTCTGGC 191
BSNT_06061___ 192 GACCATCACCTTGAGAATGCCTTGGGGAAAACAGCCG------GGACCGT 235
|||.||..|..||.|.|||||.||||| |||| ||.||||
RBAM_003910__ 192 GACGATTTCTCTGCGGATGCCGTGGGG------GCCGAATCCCGGGCCGT 235
BSNT_06061___ 236 ATGGCGTTCCGCATATCTGGTGGTTCGCTGTGGACCCCGGCACCGGTAAA 285
|.||.|||||.|||||.||||||||.||.||.||.||.|..|||||.|||
RBAM_003910__ 236 ACGGTGTTCCTCATATTTGGTGGTTTGCCGTCGATCCTGAAACCGGAAAA 285
BSNT_06061___ 286 AAAGGAATCGGAACAAAGCTGCTTCAATGGCTGGAGGAAACAATCCTTCG 335
|||||.|..||..||.|..||||..|.|||||||||.|.|||.|.||.||
RBAM_003910__ 286 AAAGGGACGGGCTCAGACATGCTGGAGTGGCTGGAGAATACAGTGCTCCG 335
BSNT_06061___ 336 TGATACGTTAAAGGTTCCGTTTGTCTCACTCGGAACAGCGGATAAGCATC 385
.||.||.|||||.|..||.||.||.|||||.||.||||||||.|||||||
RBAM_003910__ 336 CGACACATTAAAAGCGCCTTTCGTGTCACTGGGCACAGCGGACAAGCATC 385
BSNT_06061___ 386 CGTGGCTGATTGAGATGTACGAACGAAAAGGGTATGTCCGCTCAGGTGAA 435
||||||||||.|..||||||||.||||||||.||.|||||..||||.|||
RBAM_003910__ 386 CGTGGCTGATCGGCATGTACGAGCGAAAAGGCTACGTCCGTGCAGGCGAA 435
BSNT_06061___ 436 CAAGACCTTGGCAAAGGGCATATCACAGTCTATATGAAAAAACAATTGCG 485
.|.||.||.||.||||||||.|||||..|.|||.|.||||||||||||
RBAM_003910__ 436 AAGGATCTAGGAAAAGGGCACATCACCATTTATTTAAAAAAACAATTG-- 483
BSNT_06061___ 486 ACATGATCTATAA 498
||.||| |||
RBAM_003910__ 484 -CAGGAT---TAA 492
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