Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00662 and RBAM_003890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence pep-align/BSNT_00662___gerKB.1.9828.seq
# -bsequence pep-align/RBAM_003890___gerKB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00662___gerKB-RBAM_003890___gerKB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00662___gerKB-RBAM_003890___gerKB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00662___gerKB
# 2: RBAM_003890___gerKB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity: 261/376 (69.4%)
# Similarity: 317/376 (84.3%)
# Gaps: 7/376 ( 1.9%)
# Score: 1350.5
#
#
#=======================================
BSNT_00662___ 1 MEKARISIRQLFVMIIIFELGSSLLITPGSMAGRDAWIAVLLGCAIGLFL 50
||.|:|..||||:|||:|||||||||.||:|||||||::|||||.|||.|
RBAM_003890__ 1 MENAKIGTRQLFIMIILFELGSSLLIPPGTMAGRDAWLSVLLGCVIGLGL 50
BSNT_00662___ 51 FCLYQGIYQCYPNSSPKEYMDDMLGTKLSWLFSFLYILYFAYNAARVLRD 100
|.:||.:||.:|.|||::||::::|..|||..|.||||||||.|||||||
RBAM_003890__ 51 FYVYQALYQFFPESSPRDYMNELIGRHLSWAVSLLYILYFAYIAARVLRD 100
BSNT_00662___ 101 FGEMLLTFAYHDTPIIIVNALLMVVSIYAVRKGIEVLARAAELLFGVMYL 150
|||||:||||.||||:||||:||:.:|:||||||||:|||.|||||:||.
RBAM_003890__ 101 FGEMLVTFAYQDTPILIVNAMLMIAAIFAVRKGIEVIARAGELLFGIMYF 150
BSNT_00662___ 151 LGAIGLVLIIVSGTIDPHNLKPVLANGISPILHSVFTQTMYVPFGEVVLF 200
|.|:||:|||.||||:...|:||||.|...:::|||.|||::||||:::|
RBAM_003890__ 151 LTAVGLILIISSGTINLRFLQPVLAEGAGTVIYSVFKQTMFIPFGELIVF 200
BSNT_00662___ 201 VMIFPILNNRKDVKKMGMIAMAISGLVVALTVAINISVLDVDLTLRSQFP 250
|||||.|.:||.|||.|.:|:.||||.:|::|||||.||||:|.||||||
RBAM_003890__ 201 VMIFPYLKDRKKVKKTGFLAIIISGLFLAMSVAINICVLDVNLMLRSQFP 250
BSNT_00662___ 251 LLSTIQTIKVEEFLDRLDVFFMLALIIGGFFKVSLYLYATVVGTSTLFKE 300
|||||||||||||||||||||||.|:|||||||||:.||.|||.||||||
RBAM_003890__ 251 LLSTIQTIKVEEFLDRLDVFFMLVLVIGGFFKVSLFTYAVVVGVSTLFKE 300
BSNT_00662___ 301 KNLSQLAYPMGLGILILSLTIATNFSEHLNEGLNVVPLYIHLPFQLLFPL 350
||.||||:|:|||:||||::||:|||||:|||||:||:|||||||:|||:
RBAM_003890__ 301 KNPSQLAFPVGLGVLILSISIASNFSEHMNEGLNIVPIYIHLPFQVLFPV 350
BSNT_00662___ 351 FLFIVAVWKKKRREKSKGTGIKE--- 373
.|.|:||.|| |.|||....
RBAM_003890__ 351 LLLIIAVIKK----KVKGTVYTVSKK 372
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