Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00661 and RBAM_003880

See DNA alignment / Visit BSNT_00661 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence pep-align/BSNT_00661___gerKC.1.9828.seq
#    -bsequence pep-align/RBAM_003880___gerKC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00661___gerKC-RBAM_003880___gerKC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00661___gerKC-RBAM_003880___gerKC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00661___gerKC
# 2: RBAM_003880___gerKC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 408
# Identity:     268/408 (65.7%)
# Similarity:   333/408 (81.6%)
# Gaps:           1/408 ( 0.2%)
# Score: 1463.0
# 
#
#=======================================

BSNT_00661___      1 -MVRKCLLVVLMLLSAIVLPGCWDKRELTDLAIISAIGIDRTNDSNYVLH     49
                      ..||.:|::..::|.:.:.||||||||||||:|||||||||....||||
RBAM_003880__      1 MKRRKWMLILCTMVSFMFVSGCWDKRELTDLAVISAIGIDRTETGKYVLH     50

BSNT_00661___     50 LQIINPGNVAGYLQGGGGGDRPPVSVYSIEGNNLTEALRKASIKVSRRLY     99
                     |||||||||||.|||||.||||||||||:.|:|:||||||.|:|||||||
RBAM_003880__     51 LQIINPGNVAGGLQGGGAGDRPPVSVYSVSGDNMTEALRKGSMKVSRRLY    100

BSNT_00661___    100 FAHTNLVVINEKLAKEEGLDFVLDNLDRDTEFRSTATFVVAHKTKAENIV    149
                     ||||||||.:|||||||||.|:|||||||||||:|||.|:||..|||:|:
RBAM_003880__    101 FAHTNLVVFSEKLAKEEGLSFILDNLDRDTEFRTTATVVIAHNCKAEDII    150

BSNT_00661___    150 KILTPIDKIPSNKVNKTLDFTEAQYGQVVNTNIQDVLKTLAANTMAPVIP    199
                     |:||||||||||||||||.||:.|||:|:.||:||||..||:.|.:|.||
RBAM_003880__    151 KVLTPIDKIPSNKVNKTLSFTQEQYGRVIKTNLQDVLIDLASPTGSPFIP    200

BSNT_00661___    200 GFMMIGDDKKGVSMENTQATDPKAILQADGLAVFDKAGYLKYWLEDDESV    249
                     |:.|.||||.|.:|||||.|:|||:|.|||||||.|.|.|.||:|||:||
RBAM_003880__    201 GYEMHGDDKAGPTMENTQTTEPKAVLSADGLAVFKKDGRLDYWIEDDDSV    250

BSNT_00661___    250 GAVWLMNKIQHTLINADWGKTKDAVSLQVTHQDTKLVPKMRNGRPYIHVK    299
                     |||||:|:|:||.|||||...|.|:|||||.|:||:.....||:|:|||.
RBAM_003880__    251 GAVWLLNRIKHTFINADWKNVKHAISLQVTRQNTKVTATFPNGKPHIHVH    300

BSNT_00661___    300 VSVEGIIDAVKYPFQLSDPKVLAAIEKALNKELEKEISHTVKKIKKNKID    349
                     ..|||::|||:|||.||||:||..::|||:.:|||:|:.:::.||.:|.|
RBAM_003880__    301 AQVEGLVDAVRYPFHLSDPQVLMTMQKALSVQLEKDITKSIEDIKAHKND    350

BSNT_00661___    350 FIGFGDTIYRKYPEQWEKMKDTWDKEYLPELPIDVKAETYIRRTGLRNDP    399
                     |:||||.||||:|::|:|.:..||:||.|.||:|||.|..||||||||:|
RBAM_003880__    351 FVGFGDLIYRKHPDKWKKFEGKWDEEYFPNLPVDVKTEVIIRRTGLRNNP    400

BSNT_00661___    400 IKHQFKDD    407
                     :..:.:.|
RBAM_003880__    401 LSDKLEHD    408


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