Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00661 and RBAM_003880
See
DNA alignment /
Visit
BSNT_00661 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence pep-align/BSNT_00661___gerKC.1.9828.seq
# -bsequence pep-align/RBAM_003880___gerKC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00661___gerKC-RBAM_003880___gerKC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00661___gerKC-RBAM_003880___gerKC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00661___gerKC
# 2: RBAM_003880___gerKC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 408
# Identity: 268/408 (65.7%)
# Similarity: 333/408 (81.6%)
# Gaps: 1/408 ( 0.2%)
# Score: 1463.0
#
#
#=======================================
BSNT_00661___ 1 -MVRKCLLVVLMLLSAIVLPGCWDKRELTDLAIISAIGIDRTNDSNYVLH 49
..||.:|::..::|.:.:.||||||||||||:|||||||||....||||
RBAM_003880__ 1 MKRRKWMLILCTMVSFMFVSGCWDKRELTDLAVISAIGIDRTETGKYVLH 50
BSNT_00661___ 50 LQIINPGNVAGYLQGGGGGDRPPVSVYSIEGNNLTEALRKASIKVSRRLY 99
|||||||||||.|||||.||||||||||:.|:|:||||||.|:|||||||
RBAM_003880__ 51 LQIINPGNVAGGLQGGGAGDRPPVSVYSVSGDNMTEALRKGSMKVSRRLY 100
BSNT_00661___ 100 FAHTNLVVINEKLAKEEGLDFVLDNLDRDTEFRSTATFVVAHKTKAENIV 149
||||||||.:|||||||||.|:|||||||||||:|||.|:||..|||:|:
RBAM_003880__ 101 FAHTNLVVFSEKLAKEEGLSFILDNLDRDTEFRTTATVVIAHNCKAEDII 150
BSNT_00661___ 150 KILTPIDKIPSNKVNKTLDFTEAQYGQVVNTNIQDVLKTLAANTMAPVIP 199
|:||||||||||||||||.||:.|||:|:.||:||||..||:.|.:|.||
RBAM_003880__ 151 KVLTPIDKIPSNKVNKTLSFTQEQYGRVIKTNLQDVLIDLASPTGSPFIP 200
BSNT_00661___ 200 GFMMIGDDKKGVSMENTQATDPKAILQADGLAVFDKAGYLKYWLEDDESV 249
|:.|.||||.|.:|||||.|:|||:|.|||||||.|.|.|.||:|||:||
RBAM_003880__ 201 GYEMHGDDKAGPTMENTQTTEPKAVLSADGLAVFKKDGRLDYWIEDDDSV 250
BSNT_00661___ 250 GAVWLMNKIQHTLINADWGKTKDAVSLQVTHQDTKLVPKMRNGRPYIHVK 299
|||||:|:|:||.|||||...|.|:|||||.|:||:.....||:|:|||.
RBAM_003880__ 251 GAVWLLNRIKHTFINADWKNVKHAISLQVTRQNTKVTATFPNGKPHIHVH 300
BSNT_00661___ 300 VSVEGIIDAVKYPFQLSDPKVLAAIEKALNKELEKEISHTVKKIKKNKID 349
..|||::|||:|||.||||:||..::|||:.:|||:|:.:::.||.:|.|
RBAM_003880__ 301 AQVEGLVDAVRYPFHLSDPQVLMTMQKALSVQLEKDITKSIEDIKAHKND 350
BSNT_00661___ 350 FIGFGDTIYRKYPEQWEKMKDTWDKEYLPELPIDVKAETYIRRTGLRNDP 399
|:||||.||||:|::|:|.:..||:||.|.||:|||.|..||||||||:|
RBAM_003880__ 351 FVGFGDLIYRKHPDKWKKFEGKWDEEYFPNLPVDVKTEVIIRRTGLRNNP 400
BSNT_00661___ 400 IKHQFKDD 407
:..:.:.|
RBAM_003880__ 401 LSDKLEHD 408
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.