Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00660 and RBAM_003870

See DNA alignment / Visit BSNT_00660 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence pep-align/BSNT_00660___gerKA.1.9828.seq
#    -bsequence pep-align/RBAM_003870___gerKA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00660___gerKA-RBAM_003870___gerKA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00660___gerKA-RBAM_003870___gerKA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00660___gerKA
# 2: RBAM_003870___gerKA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 547
# Identity:     384/547 (70.2%)
# Similarity:   454/547 (83.0%)
# Gaps:           4/547 ( 0.7%)
# Score: 1956.5
# 
#
#=======================================

BSNT_00660___      1 MPLFSKRK--NNTGSKDKQNTDERNQEQQQEKERPVLISPSLAKNIAETK     48
                     ||.|.|:|  ......|:.|...:..:.|.:|||...||.||.:|:.:..
RBAM_003870__      1 MPPFFKQKKQKKADQNDRDNEGRKEADSQPDKERDEPISLSLKQNMKKLS     50

BSNT_00660___     49 KEVGSSSDVIIREIKIGEQDHVHLAVIYIAGLVDNNTIHESLIDPLVQDE     98
                     :..|:|:||:||.:|||::: :..|::|||||||...:.:||::.|:...
RBAM_003870__     51 ERFGNSADVVIRRLKIGKEE-LPAAIVYIAGLVDEQLVSQSLLEDLIDIP     99

BSNT_00660___     99 SIQNTHAIQQILEKTLPLGGVKAEKSWDKLFSELMLGNALIFADGHDEAL    148
                     |:|...|:..|.:|||.:||||..:.|..|::.|:.|:.|||.||.|:||
RBAM_003870__    100 SVQPEQAVCLIYDKTLAIGGVKEAEKWKSLYAGLVAGSTLIFVDGADKAL    149

BSNT_00660___    149 ICSTQGGEQRSIQEPSTQASFRGPRQGFTESLQTNISMIRRYIKNPNLWV    198
                     |.||:|||.|||||||||.|||||||||||||||||||||||:|.|::||
RBAM_003870__    150 IASTEGGEHRSIQEPSTQVSFRGPRQGFTESLQTNISMIRRYVKTPDVWV    199

BSNT_00660___    199 EKMKKGSVTNTDIALMYIQGICDKKVLKEVKLRLEKIDIDSILESGYIEQ    248
                     |||:.|..||||:|||||.||||||::|||:.||:.||||||||||||||
RBAM_003870__    200 EKMEIGHETNTDVALMYINGICDKKLIKEVRKRLKHIDIDSILESGYIEQ    249

BSNT_00660___    249 LIEDETFTTFPTMYHTERPDVVAGNLLEGRFAIIVDGTPFVLIAPALFVQ    298
                     ||||..|:.|||:|||||||||||||||||||||||||||||||||||:|
RBAM_003870__    250 LIEDAPFSVFPTVYHTERPDVVAGNLLEGRFAIIVDGTPFVLIAPALFIQ    299

BSNT_00660___    299 FFQSVEDYYSRFDIATSIRILRVLVFFISLVAPAVYVAATTFHQEMIPTE    348
                     |||||||||||||||||||:||||:||||||||.:||||||||||||||:
RBAM_003870__    300 FFQSVEDYYSRFDIATSIRVLRVLIFFISLVAPGIYVAATTFHQEMIPTQ    349

BSNT_00660___    349 LLVVIAAQRESVPFPAVVEALTMEVAFEILREAGFRLPRVVGSAVSIVGA    398
                     ||:|||||||:||||||:||||||||||||||||.|||||||||||||||
RBAM_003870__    350 LLIVIAAQRETVPFPAVIEALTMEVAFEILREAGVRLPRVVGSAVSIVGA    399

BSNT_00660___    399 LVIGQAAVQAGIVSPAMVIIVALTAIASFATPAFAMAISARLIRFIFLIA    448
                     |||||||||||||||||||:||||||||||||||.||||||||||:|:::
RBAM_003870__    400 LVIGQAAVQAGIVSPAMVIVVALTAIASFATPAFDMAISARLIRFLFILS    449

BSNT_00660___    449 SAVMGFYGLILGIIMMFVHLCSLRSYGVPYMSPLAPFSSQGVKDTLFRVP    498
                     :||||||||||||||||||||.|||:|.||||||||.:..|:||:|.|.|
RBAM_003870__    450 AAVMGFYGLILGIIMMFVHLCGLRSFGFPYMSPLAPLTPGGLKDSLLRAP    499

BSNT_00660___    499 WWADEKRPESVSKEDKVRQGQDQRPEPAASRGMVNKDLEEGDKNGT-    544
                     .|||||||..:.:|:..|||:.|||:|..||||||||:||||.|.. 
RBAM_003870__    500 LWADEKRPGMLVQENNRRQGEHQRPKPETSRGMVNKDVEEGDGNEKT    546


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