Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00650 and RBAM_003830

See DNA alignment / Visit BSNT_00650 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence pep-align/BSNT_00650.1.9828.seq
#    -bsequence pep-align/RBAM_003830___yclD2.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00650-RBAM_003830___yclD2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00650-RBAM_003830___yclD2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00650
# 2: RBAM_003830___yclD2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:      49/148 (33.1%)
# Similarity:    66/148 (44.6%)
# Gaps:          65/148 (43.9%)
# Score: 254.0
# 
#
#=======================================

BSNT_00650         1 MSDRLFELLDGSCLNEKQHEAFVLQTVSEDGWPHAAMISAGEIIALSRTD     50
                     |.:.|:.||||:.|.:|||:|||||:|:::|.|||||||||||:|:|||:
RBAM_003830__      1 MPEALYTLLDGTELEKKQHDAFVLQSVTKEGRPHAAMISAGEIVAVSRTN     50

BSNT_00650        51 IRIALWKNTMTSANILRTGTAQFTAWWKGAAIM-----------------     83
                     :|:||||||.|..::|.:|.|.|.||..|||..                 
RBAM_003830__     51 LRLALWKNTTTVRSLLHSGQALFIAWHGGAAYYVTLECEALPPLKEAKHE    100

BSNT_00650        83 ------------------------------------------------     83
                                                                     
RBAM_003830__    101 RERFSCRVITVKEDRAKYADLTSGPAIQLHEPEDVLKRWRETLEELKR    148


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