Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00643 and RBAM_003790

See DNA alignment / Visit BSNT_00643 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence pep-align/BSNT_00643___yclA.1.9828.seq
#    -bsequence pep-align/RBAM_003790___yclA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00643___yclA-RBAM_003790___yclA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00643___yclA-RBAM_003790___yclA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00643___yclA
# 2: RBAM_003790___yclA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     231/290 (79.7%)
# Similarity:   266/290 (91.7%)
# Gaps:           0/290 ( 0.0%)
# Score: 1206.0
# 
#
#=======================================

BSNT_00643___      1 MDIRQPRYFITIAQEQKITSAAKKLHMAQPPLSRQLKQLEDELGVVLFDR     50
                     |||||.|||||||||||||:||||||||||||||||||||:||||:||||
RBAM_003790__      1 MDIRQLRYFITIAQEQKITTAAKKLHMAQPPLSRQLKQLEEELGVILFDR     50

BSNT_00643___     51 NKKKQMTLTYEGAVFLKRAKEILHRFEDAVIEVQELKEEVAGTLAVGSTI    100
                     ||||||||||||.|||||||||||:||||:||||||||||||||||||||
RBAM_003790__     51 NKKKQMTLTYEGNVFLKRAKEILHKFEDAIIEVQELKEEVAGTLAVGSTI    100

BSNT_00643___    101 YCAALMLEKVTQIKERYPHLTFNIWENEPATLLELLESRQIDAAVTTTLI    150
                     ||||||||||:|:|||:|||||||||:||.:||||||:||||||||||||
RBAM_003790__    101 YCAALMLEKVSQMKERFPHLTFNIWEDEPVSLLELLETRQIDAAVTTTLI    150

BSNT_00643___    151 KSDTVQFKQLDDIPCVLVLSDEAGYPCGDTIKMEDIPSFPLILLRPVNGK    200
                     |:|.::.|:|:|||||||||:.:...||:|||:.||.|.||||||.|||:
RBAM_003790__    151 KNDGIESKELEDIPCVLVLSEHSKRLCGETIKLNDIASLPLILLRTVNGR    200

BSNT_00643___    201 GVYNQVMNEFHRLNLEPRIVCECHDSATLLSLVSSGFGASILPVTMIPVH    250
                     |||:||:....:..|:.::||||||||||||||||||||:|||:||||||
RBAM_003790__    201 GVYDQVLQVCEQYGLDLQVVCECHDSATLLSLVSSGFGATILPLTMIPVH    250

BSNT_00643___    251 MRNHVHTVHIENNPFIMTPAVMWRTDSYLPKPAQQFLDLF    290
                     ||:||.||.||:|||:|||||:||.|||||||.:|||:||
RBAM_003790__    251 MRSHVKTVIIEDNPFVMTPAVIWRKDSYLPKPVRQFLELF    290


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