Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00633 and RBAM_003730

See DNA alignment / Visit BSNT_00633 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_00633___ycxD.1.9828.seq
#    -bsequence pep-align/RBAM_003730___ycxD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00633___ycxD-RBAM_003730___ycxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00633___ycxD-RBAM_003730___ycxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00633___ycxD
# 2: RBAM_003730___ycxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     319/444 (71.8%)
# Similarity:   370/444 (83.3%)
# Gaps:           8/444 ( 1.8%)
# Score: 1632.5
# 
#
#=======================================

BSNT_00633___      1 MEKYMSLLMRIEEMMQSTAYQEGDRLPSIRQLSARYQVSKSTVIRALQEL     50
                     |||||::::.:|.:::...:|||.||||||||:.|:.|||||||||||||
RBAM_003730__      1 MEKYMNVMIEVESLIEGGTFQEGARLPSIRQLAERFHVSKSTVIRALQEL     50

BSNT_00633___     51 EKRHLIYSVPKSGYYIVKKTGKSRSGQPGPIDFATSAPDPDVFPYLDFQH    100
                     ||||:||:|||||||::|...|....|.|.||||.||||||:|||.||||
RBAM_003730__     51 EKRHIIYAVPKSGYYLIKNDKKQEREQTGIIDFAASAPDPDIFPYRDFQH    100

BSNT_00633___    101 CINKAIDTYKNDLFIYGTPKGLPSLIRVLRKLLATQQVFADERHIFITSG    150
                     |||||||.|||||||||||:|||||||||:.||:..||||.||:||||||
RBAM_003730__    101 CINKAIDMYKNDLFIYGTPQGLPSLIRVLQTLLSDYQVFAKERNIFITSG    150

BSNT_00633___    151 VQQALSLLCAMPFPNGKEKIAIEQPGYHLMVEQLETLGIPAIGVKRTEEG    200
                     ||||||||..|||||||:||.||||||||||||||.|.:||.|:|||.||
RBAM_003730__    151 VQQALSLLSLMPFPNGKKKILIEQPGYHLMVEQLEALRLPACGIKRTAEG    200

BSNT_00633___    201 LDIAEVERLFQTESIKFFYTMPRFHNPLGYSLSERDKQELVRLAEAYDVY    250
                     ||:||||||||||.|||||||||||||||.||:|..|:||||||||||||
RBAM_003730__    201 LDMAEVERLFQTEGIKFFYTMPRFHNPLGSSLTEWQKRELVRLAEAYDVY    250

BSNT_00633___    251 LVEDDYLGDLEENKKADPLYAYDLSSHVIYLKSFSKMMFPGLRVGAAVLP    300
                     |||||:|||||:|:||||||||||||.||||||||||:||||||||||||
RBAM_003730__    251 LVEDDFLGDLEDNQKADPLYAYDLSSRVIYLKSFSKMIFPGLRVGAAVLP    300

BSNT_00633___    301 EALTDTFYAYKKLNDIDCSMISQAALEIYLKSGMYGRHKEKIRDSYKERS    350
                     ::|...|:.||||:|||||||||||||:|:||||:.|||||||.||:.||
RBAM_003730__    301 DSLAPVFHTYKKLSDIDCSMISQAALEVYIKSGMFKRHKEKIRASYRTRS    350

BSNT_00633___    351 LKLHQAIQTHRQLGSGRFTFSSGQAPCMHTHLVLPQDLPASRVIHRLKKQ    400
                     ..|..|:|.:    .|   ||..|. .:||||||.:.|.||||:.|||.|
RBAM_003730__    351 ELLQNALQEY----DG---FSVKQT-SIHTHLVLEKSLSASRVVQRLKAQ    392

BSNT_00633___    401 GVLLEAIDRHYLSDYQKENLLKINISNVKTEDIERGVKLLMSHL    444
                     |||:|.||.|||||:.|||::|:|:|||||.||.||:|:|...|
RBAM_003730__    393 GVLVEPIDSHYLSDFPKENIIKLNVSNVKTGDITRGIKMLTDCL    436


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