Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00633 and RBAM_003730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:22
# Commandline: needle
# -asequence pep-align/BSNT_00633___ycxD.1.9828.seq
# -bsequence pep-align/RBAM_003730___ycxD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00633___ycxD-RBAM_003730___ycxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00633___ycxD-RBAM_003730___ycxD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00633___ycxD
# 2: RBAM_003730___ycxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 319/444 (71.8%)
# Similarity: 370/444 (83.3%)
# Gaps: 8/444 ( 1.8%)
# Score: 1632.5
#
#
#=======================================
BSNT_00633___ 1 MEKYMSLLMRIEEMMQSTAYQEGDRLPSIRQLSARYQVSKSTVIRALQEL 50
|||||::::.:|.:::...:|||.||||||||:.|:.|||||||||||||
RBAM_003730__ 1 MEKYMNVMIEVESLIEGGTFQEGARLPSIRQLAERFHVSKSTVIRALQEL 50
BSNT_00633___ 51 EKRHLIYSVPKSGYYIVKKTGKSRSGQPGPIDFATSAPDPDVFPYLDFQH 100
||||:||:|||||||::|...|....|.|.||||.||||||:|||.||||
RBAM_003730__ 51 EKRHIIYAVPKSGYYLIKNDKKQEREQTGIIDFAASAPDPDIFPYRDFQH 100
BSNT_00633___ 101 CINKAIDTYKNDLFIYGTPKGLPSLIRVLRKLLATQQVFADERHIFITSG 150
|||||||.|||||||||||:|||||||||:.||:..||||.||:||||||
RBAM_003730__ 101 CINKAIDMYKNDLFIYGTPQGLPSLIRVLQTLLSDYQVFAKERNIFITSG 150
BSNT_00633___ 151 VQQALSLLCAMPFPNGKEKIAIEQPGYHLMVEQLETLGIPAIGVKRTEEG 200
||||||||..|||||||:||.||||||||||||||.|.:||.|:|||.||
RBAM_003730__ 151 VQQALSLLSLMPFPNGKKKILIEQPGYHLMVEQLEALRLPACGIKRTAEG 200
BSNT_00633___ 201 LDIAEVERLFQTESIKFFYTMPRFHNPLGYSLSERDKQELVRLAEAYDVY 250
||:||||||||||.|||||||||||||||.||:|..|:||||||||||||
RBAM_003730__ 201 LDMAEVERLFQTEGIKFFYTMPRFHNPLGSSLTEWQKRELVRLAEAYDVY 250
BSNT_00633___ 251 LVEDDYLGDLEENKKADPLYAYDLSSHVIYLKSFSKMMFPGLRVGAAVLP 300
|||||:|||||:|:||||||||||||.||||||||||:||||||||||||
RBAM_003730__ 251 LVEDDFLGDLEDNQKADPLYAYDLSSRVIYLKSFSKMIFPGLRVGAAVLP 300
BSNT_00633___ 301 EALTDTFYAYKKLNDIDCSMISQAALEIYLKSGMYGRHKEKIRDSYKERS 350
::|...|:.||||:|||||||||||||:|:||||:.|||||||.||:.||
RBAM_003730__ 301 DSLAPVFHTYKKLSDIDCSMISQAALEVYIKSGMFKRHKEKIRASYRTRS 350
BSNT_00633___ 351 LKLHQAIQTHRQLGSGRFTFSSGQAPCMHTHLVLPQDLPASRVIHRLKKQ 400
..|..|:|.: .| ||..|. .:||||||.:.|.||||:.|||.|
RBAM_003730__ 351 ELLQNALQEY----DG---FSVKQT-SIHTHLVLEKSLSASRVVQRLKAQ 392
BSNT_00633___ 401 GVLLEAIDRHYLSDYQKENLLKINISNVKTEDIERGVKLLMSHL 444
|||:|.||.|||||:.|||::|:|:|||||.||.||:|:|...|
RBAM_003730__ 393 GVLVEPIDSHYLSDFPKENIIKLNVSNVKTGDITRGIKMLTDCL 436
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