Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00627 and RBAM_003690

See DNA alignment / Visit BSNT_00627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence pep-align/BSNT_00627___srfAD.1.9828.seq
#    -bsequence pep-align/RBAM_003690___srfAD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00627___srfAD-RBAM_003690___srfAD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00627___srfAD-RBAM_003690___srfAD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00627___srfAD
# 2: RBAM_003690___srfAD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     188/243 (77.4%)
# Similarity:   210/243 (86.4%)
# Gaps:           1/243 ( 0.4%)
# Score: 1012.0
# 
#
#=======================================

BSNT_00627___      1 MSQLFKSFDASEKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGH     50
                     |.|||||||.:||||||||||||||||||||||.:|||||||||||||||
RBAM_003690__      1 MVQLFKSFDTTEKTQLICFPFAGGYSASFRPLHTYLQGECEMLAAEPPGH     50

BSNT_00627___     51 GTNQTSAIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLE    100
                     ||||.||:||.|:|..||||||||.|||||||||||||||:.||||||||
RBAM_003690__     51 GTNQMSAVEDFEQLVSLYKQELNLHPDRPFVLFGHSMGGMVAFRLAQKLE    100

BSNT_00627___    101 REGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENK    150
                     ||||:|||||||||||||::|||||||.|::||.|||:|||||.||||||
RBAM_003690__    101 REGIYPQAVIISAIQPPHVERKKVSHLDDEKFLAHIIELGGMPQELVENK    150

BSNT_00627___    151 EVMSFFLPSFRSDYRALEQFELYDLAQIQSPVHVFNGLDDKKCIRDAEGW    200
                     ||||||||||||||||||.|...|...||||||:|||..|||||:||:||
RBAM_003690__    151 EVMSFFLPSFRSDYRALESFRPSDSHIIQSPVHIFNGRKDKKCIKDADGW    200

BSNT_00627___    201 KKWAKDITFHQFDGGHMFLLSQTEEVAERIFAILNQHPIIQP-    242
                     ||||.:..||:|..||||:||:||:|||||:.|:|:....|. 
RBAM_003690__    201 KKWADNPVFHEFSDGHMFILSETEKVAERIYEIINRSTAGQLL    243


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