Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00616 and RBAM_003640

See DNA alignment / Visit BSNT_00616 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence pep-align/BSNT_00616___hxlR.1.9828.seq
#    -bsequence pep-align/RBAM_003640___hxlR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00616___hxlR-RBAM_003640___hxlR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00616___hxlR-RBAM_003640___hxlR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00616___hxlR
# 2: RBAM_003640___hxlR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:     104/120 (86.7%)
# Similarity:   110/120 (91.7%)
# Gaps:           0/120 ( 0.0%)
# Score: 551.0
# 
#
#=======================================

BSNT_00616___      1 MSRMDDKRFNCEKELTLAVIGGKWKMLILWHLGKEGTKRFNELKTLIPDI     50
                     |||||.|.||||||||||||||||||||:|||||||||||||||.|||||
RBAM_003640__      1 MSRMDKKTFNCEKELTLAVIGGKWKMLIMWHLGKEGTKRFNELKALIPDI     50

BSNT_00616___     51 TQKILVNQLRELEQDMIVHREVYPVVPPKVEYSLTPHGESLMPILEAMYE    100
                     |.|||||||||||||:|||||||||||||||||||..||||||||:|||:
RBAM_003640__     51 THKILVNQLRELEQDLIVHREVYPVVPPKVEYSLTAQGESLMPILDAMYK    100

BSNT_00616___    101 WGKGYMELIDIDKNVMKESL    120
                     |||.|||||:|||..:|||.
RBAM_003640__    101 WGKDYMELINIDKTAIKESF    120


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