Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00616 and RBAM_003640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:21
# Commandline: needle
# -asequence dna-align/BSNT_00616___hxlR.1.9828.seq
# -bsequence dna-align/RBAM_003640___hxlR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00616___hxlR-RBAM_003640___hxlR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00616___hxlR-RBAM_003640___hxlR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00616___hxlR
# 2: RBAM_003640___hxlR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 291/363 (80.2%)
# Similarity: 291/363 (80.2%)
# Gaps: 0/363 ( 0.0%)
# Score: 1167.0
#
#
#=======================================
BSNT_00616___ 1 TTGAGCCGGATGGACGACAAAAGGTTTAATTGTGAGAAGGAATTAACGCT 50
.|||||||.|||||..|.||||.|||||||||.||.||||||||.|||||
RBAM_003640__ 1 GTGAGCCGAATGGATAAGAAAACGTTTAATTGCGAAAAGGAATTGACGCT 50
BSNT_00616___ 51 TGCAGTGATTGGCGGTAAATGGAAAATGCTCATTTTATGGCATTTAGGAA 100
|||.|||||.|||||.||.|||||||||||.|||.|.|||||.||.||||
RBAM_003640__ 51 TGCCGTGATAGGCGGGAAGTGGAAAATGCTGATTATGTGGCACTTGGGAA 100
BSNT_00616___ 101 AAGAAGGCACAAAACGGTTCAATGAATTAAAAACATTGATTCCTGATATT 150
|||||||.||.||.|||||.|||||..|.|||.|.||.|||||.||||||
RBAM_003640__ 101 AAGAAGGGACGAAGCGGTTTAATGAGCTGAAAGCTTTAATTCCGGATATT 150
BSNT_00616___ 151 ACGCAGAAGATCCTCGTGAATCAGCTGAGAGAGCTTGAGCAGGATATGAT 200
|||||.||.||.||.|||||||||||.||.|||||.|||||||||.||||
RBAM_003640__ 151 ACGCACAAAATTCTTGTGAATCAGCTCAGGGAGCTGGAGCAGGATCTGAT 200
BSNT_00616___ 201 TGTTCACAGGGAAGTGTATCCAGTTGTCCCGCCGAAGGTTGAATATTCTC 250
.||||||||||||||.||.||.||.|||||.|||||.||.||.||||||.
RBAM_003640__ 201 CGTTCACAGGGAAGTTTACCCTGTCGTCCCTCCGAAAGTGGAGTATTCTT 250
BSNT_00616___ 251 TGACCCCGCACGGAGAAAGCCTCATGCCTATTCTTGAAGCCATGTATGAG 300
|.||..||||.|||||||||||.|||||.|||||.||.|||||||||.||
RBAM_003640__ 251 TAACGGCGCAAGGAGAAAGCCTTATGCCGATTCTGGACGCCATGTATAAG 300
BSNT_00616___ 301 TGGGGGAAAGGTTATATGGAATTGATTGATATCGACAAAAATGTCATGAA 350
|||||.||||.||||||||||||.||..|.||.||.||||.||..||.||
RBAM_003640__ 301 TGGGGAAAAGATTATATGGAATTAATCAACATTGATAAAACTGCAATAAA 350
BSNT_00616___ 351 AGAATCGTTGTAA 363
.|||||.||.|.|
RBAM_003640__ 351 GGAATCTTTTTGA 363
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