Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00610 and RBAM_003610

See DNA alignment / Visit BSNT_00610 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:21
# Commandline: needle
#    -asequence pep-align/BSNT_00610___nucA.1.9828.seq
#    -bsequence pep-align/RBAM_003610___nucA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00610___nucA-RBAM_003610___nucA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00610___nucA-RBAM_003610___nucA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00610___nucA
# 2: RBAM_003610___nucA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:     103/149 (69.1%)
# Similarity:   119/149 (79.9%)
# Gaps:           4/149 ( 2.7%)
# Score: 563.0
# 
#
#=======================================

BSNT_00610___      1 MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFP     50
                         ...:|.:|||::|||.|...|||||.||.:::|.|..:||:.|.||
RBAM_003610__      1 ----MKTLKALLLVLIIIAGAVAALIKGDLFSDNEQTVQKSDYDKVILFP     46

BSNT_00610___     51 SDRYPETAKHIKDAINEGHSEVCTIDRDGAEERREQSLKDVPSKKGYDRD    100
                     |||||||||||||||.||||.:|||||||..:|||||||.||.|.|||||
RBAM_003610__     47 SDRYPETAKHIKDAIKEGHSSICTIDRDGVHKRREQSLKHVPVKTGYDRD     96

BSNT_00610___    101 EWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ    149
                     |||||:||:||..|||||||||||||||||||||||:.||||:|||.|:
RBAM_003610__     97 EWPMAVCKQGGNNASVEYISPADNRGAGSWVGHQLTNDPDGTRVLFKIK    145


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